chr4 : 61,773,728 61,774,140
412 bp 39 TFs 1 linked gene
This 412 bp open chromatin element is linked to ENSG00000289308 and is bound by 39 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000289308 4.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:61,768,728 – 61,779,140
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 365 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 255 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 239 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 319 bp overlap
ChIP DE DE-FOXA2-2 334 bp overlap
ChIP liver ENCFF888VJF 260 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 171 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 300 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 339 bp overlap
GATA2 1 dataset
Motif ES_0h ES_0h-GATA2_MA0036.4 7 bp overlap
GATA4 3 datasets
Motif ES_0h ES_0h-GATA4_MA0482.3 8 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 371 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 354 bp overlap
GATA5 1 dataset
Motif ES_0h ES_0h-GATA5_MA0766.3 8 bp overlap
GATA6 4 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 141 bp overlap
ChIP DE DE-GATA6-2 270 bp overlap
Motif ES_0h ES_0h-GATA6_MA1104.3 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 365 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 112 bp overlap
Gata3 1 dataset
Motif ES_0h ES_0h-Gata3_MA0037.5 8 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 299 bp overlap
Hand1 1 dataset
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
IRF4 1 dataset
Motif ES_0h ES_0h-IRF4_MA1419.2 14 bp overlap
IRF5 1 dataset
Motif ES_0h ES_0h-IRF5_MA1420.1 14 bp overlap
IRF6 1 dataset
Motif ES_0h ES_0h-IRF6_MA1509.1 9 bp overlap
IRF8 1 dataset
Motif ES_0h ES_0h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif ES_0h ES_0h-IRF9_MA0653.1 15 bp overlap
Irf1 1 dataset
Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 412 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 374 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 338 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 240 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 186 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 360 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 225 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 132 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 406 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 352 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 161 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 311 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 165 bp overlap
ChIP hESC GSE20650.NANOG.hESC 184 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 354 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 295 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 204 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 357 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 287 bp overlap
Rarg 1 dataset
Motif ES_0h ES_0h-Rarg_MA0860.1 17 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 399 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 335 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 86 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 376 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 234 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 351 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 252 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 160 bp overlap
STAT1::STAT2 2 datasets
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap
Stat2 1 dataset
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 132 bp overlap
TCF12 3 datasets
ChIP H1 ENCFF203EBH 207 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 110 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 184 bp overlap
TRPS1 1 dataset
Motif ES_0h ES_0h-TRPS1_MA1970.2 8 bp overlap
ZNF317 1 dataset
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF582 1 dataset
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap