Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap

BAP1 1 dataset

ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 416 bp overlap

BRD4 3 datasets

ChIP HCC1395 GSE63581.BRD4.HCC1395 58 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 598 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 372 bp overlap

CHD7 2 datasets

ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 199 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 636 bp overlap

CTCF 1 dataset

ChIP endodermal cell ENCFF471YCZ 227 bp overlap

ESR1 1 dataset

ChIP breast_tumor_Male_16 GSE104399.ESR1.breast_tumor_Male_16 275 bp overlap

FLI1 2 datasets

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 229 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 184 bp overlap

GATA4 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 262 bp overlap

GATA6 7 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 735 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 360 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 319 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 735 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 347 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 735 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 735 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 441 bp overlap

HAND2 1 dataset

Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap

HNF1A 1 dataset

ChIP HEE_1 GSE76376.HNF1A.HEE_1 203 bp overlap

JUN 7 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 537 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 467 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 664 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 393 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 453 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 562 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 591 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 528 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 271 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 423 bp overlap

NEUROG2 1 dataset

Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap

NR2F1 1 dataset

Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap

ONECUT1 2 datasets

ChIP H9 ERP004206.ONECUT1.H9 309 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 487 bp overlap

PDX1 2 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 295 bp overlap

ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 224 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 313 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 417 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 504 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 545 bp overlap

RELA 10 datasets

ChIP 786-O GSE86092.RELA.786-O 246 bp overlap

ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 152 bp overlap

ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 173 bp overlap

ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 86 bp overlap

ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 291 bp overlap

ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 160 bp overlap

ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 206 bp overlap

ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 244 bp overlap

ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 143 bp overlap

ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 165 bp overlap

RXR 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 251 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 401 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 591 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 372 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 336 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 414 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 195 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 360 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 343 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 211 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 415 bp overlap

SMARCC1 4 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 600 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 378 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 205 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 367 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 498 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 321 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 266 bp overlap

TCF3 1 dataset

ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 261 bp overlap

TP63 1 dataset

ChIP foreskin GSE126390.TP63.foreskin 76 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 252 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 137 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Genome Browser