chr4 : 17,003,463 17,004,269
806 bp 31 TFs 1 linked gene
This 806 bp open chromatin element is linked to LDB2 and is bound by 31 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LDB2 105.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:16,998,463 – 17,009,269
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
BCL6B 1 dataset
Motif DE_24h DE_24h-BCL6B_MA0731.1 17 bp overlap
CREB1 2 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
GATA6 1 dataset
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
GMEB2 1 dataset
Motif DE_24h DE_24h-GMEB2_MA0862.1 8 bp overlap
Gmeb1 1 dataset
Motif DE_24h DE_24h-Gmeb1_MA0615.2 6 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HOXB13 1 dataset
Motif DE_24h DE_24h-HOXB13_MA0901.3 9 bp overlap
Hoxa13 1 dataset
Motif DE_24h DE_24h-Hoxa13_MA0650.4 8 bp overlap
JUN 5 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 326 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 357 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 362 bp overlap
Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap
MAFF 1 dataset
Motif ES_0h ES_0h-MAFF_MA0495.4 11 bp overlap
MAFK 1 dataset
Motif DE_24h DE_24h-MAFK_MA0496.4 10 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 179 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap
Mafb 1 dataset
Motif ES_0h ES_0h-Mafb_MA0117.3 11 bp overlap
NANOG 2 datasets
ChIP GM23338 ENCFF065NZG 292 bp overlap
ChIP GM23338 ENCFF065NZG 311 bp overlap
NRL 1 dataset
Motif ES_0h ES_0h-NRL_MA0842.3 12 bp overlap
Nfat5 1 dataset
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 562 bp overlap
ChIP GM23338 ENCFF333SNB 284 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 424 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 514 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 382 bp overlap
TBP 1 dataset
Motif DE_24h DE_24h-TBP_MA0108.3 7 bp overlap
TEAD1 2 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
TEAD2 2 datasets
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
TEAD4 2 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
THAP1 1 dataset
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
ZNF157 1 dataset
Motif DE_24h DE_24h-ZNF157_MA2331.1 21 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap