chr3 : 160,458,248 160,458,449
201 bp 35 TFs 2 linked genes
This 201 bp open chromatin element is linked to TRIM59-IFT80 and TRIM59 and is bound by 35 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TRIM59-IFT80 8.4 kb Proximal Proximity
TRIM59 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:160,453,248 – 160,463,449
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 201 bp overlap
ChIP K562 ENCFF938UXQ 201 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 153 bp overlap
BATF 1 dataset
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 172 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 201 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 201 bp overlap
ChIP K562 ENCFF673OEZ 200 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 169 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 196 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 201 bp overlap
ChIP K562 ENCFF739JDE 201 bp overlap
ChIP K562 ENCFF775HUO 201 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 137 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 201 bp overlap
ChIP DE DE-FOXA2-2 201 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR302AWT.FOXK2.K-562 201 bp overlap
ChIP K562 ENCFF245WKP 201 bp overlap
GATA1 8 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 110 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 201 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 175 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 201 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 201 bp overlap
ChIP K562 ENCFF094CMK 201 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 148 bp overlap
GATA2 4 datasets
ChIP K-562 ENCSR000BKM.GATA2.K-562 166 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 184 bp overlap
ChIP K562 ENCFF544PCK 201 bp overlap
ChIP K562 ENCFF830LLA 201 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 201 bp overlap
ChIP DE DE-GATA4-2 201 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 197 bp overlap
ChIP foregut GSE117136.GATA4.foregut 201 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 201 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 201 bp overlap
GATA6 11 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 114 bp overlap
ChIP DE DE-GATA6-1 201 bp overlap
ChIP DE DE-GATA6-2 201 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 199 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 196 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 201 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 194 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 201 bp overlap
ChIP foregut GSE117136.GATA6.foregut 201 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 194 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 201 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 72 bp overlap
IRF4 1 dataset
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 201 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 57 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR113LAS.MTA2.K-562 195 bp overlap
ChIP K562 ENCFF880VZB 201 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 189 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 137 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 201 bp overlap
ChIP K562 ENCFF236IUS 160 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 173 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 201 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 201 bp overlap
ChIP K562 ENCFF506JCB 201 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 197 bp overlap
SPIB 1 dataset
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 126 bp overlap
TAL1 12 datasets
ChIP CD34 GSE52924.TAL1.CD34 102 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 201 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 201 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 163 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 179 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 179 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 201 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 201 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 185 bp overlap
ChIP K562 ENCFF620GMX 201 bp overlap
ChIP K562 ENCFF661CCK 201 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 128 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 186 bp overlap
ChIP K562 ENCFF931DJY 201 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 166 bp overlap
ChIP K562 ENCFF319QZT 201 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 201 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 54 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 198 bp overlap