chr3 : 159,731,318 159,731,732
414 bp 23 TFs 2 linked genes
This 414 bp open chromatin element is linked to ENSG00000286913 and SCHIP1 and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000286913 at TSS At TSS Proximity
SCHIP1 641 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:159,726,318 – 159,736,732
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 187 bp overlap
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 135 bp overlap
CHD8 1 dataset
ChIP T-47D_R5020_5 GSE62428.CHD8.T-47D_R5020_5 176 bp overlap
CTCF 26 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 270 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 185 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 180 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 100 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 88 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF424NQR 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 137 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 195 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 110 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 309 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 190 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 156 bp overlap
ChIP keratinocyte ENCFF046PBT 79 bp overlap
ChIP keratinocyte ENCFF291YDC 79 bp overlap
ChIP keratinocyte ENCFF667ULX 325 bp overlap
ChIP keratinocyte ENCFF805QIE 301 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 387 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 256 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 276 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 205 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 158 bp overlap
CTCFL 1 dataset
ChIP K-562 ENCSR000BNK.CTCFL.K-562 125 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 345 bp overlap
ChIP BLaER1 ENCFF460KDD 101 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 163 bp overlap
EZH2 2 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 283 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 311 bp overlap
GATA3 1 dataset
ChIP T-47D GSE51274.GATA3.T-47D 131 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 86 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 248 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 100 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 402 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 353 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 206 bp overlap
RAD21 1 dataset
ChIP HepG2 ENCFF360ZSW 217 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 130 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 364 bp overlap
SMARCA4 3 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 217 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 157 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 414 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 175 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 145 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 204 bp overlap
ZNF770 2 datasets
ChIP HEK293 GSE76494.ZNF770.HEK293 230 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 267 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 294 bp overlap