chr3 : 146,072,013 146,072,351
338 bp 25 TFs 1 linked gene
This 338 bp open chromatin element is linked to LNCSRLR and is bound by 25 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LNCSRLR 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:146,067,013 – 146,077,351
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
ATF2 2 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 279 bp overlap
ChIP HepG2 ENCFF955VER 266 bp overlap
ATF3 5 datasets
ChIP K-562 ENCSR632DCH.ATF3.K-562 230 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 63 bp overlap
ChIP K562 ENCFF921JQW 232 bp overlap
ChIP liver ENCSR205FOW.ATF3.liver 184 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 168 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 275 bp overlap
CEBPB 2 datasets
ChIP K562 ENCFF584CTB 137 bp overlap
ChIP K562 ENCFF584CTB 337 bp overlap
CTCF 1 dataset
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap
EGR1 1 dataset
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 182 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE68356.ESR1.MCF-7 112 bp overlap
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 130 bp overlap
EZH2 2 datasets
ChIP DND-41 ENCFF187XWF 327 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 327 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 207 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 236 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 266 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 158 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 132 bp overlap
ChIP HepG2 ENCFF854JLR 185 bp overlap
JUN 2 datasets
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 130 bp overlap
ChIP Hep-G2 ENCSR000EEK.JUN.Hep-G2 151 bp overlap
JUND 3 datasets
ChIP HepG2 ENCFF869OPW 193 bp overlap
ChIP liver ENCFF557PGE 317 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 209 bp overlap
MBD4 1 dataset
ChIP Hep-G2 ENCSR000BQW.MBD4.Hep-G2 141 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 254 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 121 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 137 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 261 bp overlap
PRDM6 1 dataset
ChIP HEK293 GSE76494.PRDM6.HEK293 161 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 283 bp overlap
ChIP HepG2 ENCFF561IAJ 142 bp overlap
RELA 2 datasets
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 103 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 91 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 126 bp overlap
ChIP liver ENCFF807CIA 279 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 178 bp overlap
TAL1 2 datasets
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 188 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 161 bp overlap