chr3 : 142,735,605 142,735,823
218 bp 31 TFs 0 linked genes
This 218 bp open chromatin element has no linked target genes and is bound by 31 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:142,730,605 – 142,740,823
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 127 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 158 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 218 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 99 bp overlap
BRD4 1 dataset
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 157 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 206 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 83 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 218 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 218 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 218 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 201 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 218 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 218 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 211 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 218 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 143 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 218 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 142 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 116 bp overlap
FOXA1 2 datasets
ChIP LNCaP GSE64656.FOXA1.LNCaP 56 bp overlap
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 218 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 57 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 161 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 184 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 218 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 78 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 218 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 207 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 61 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 178 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 218 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 218 bp overlap
PHOX2B 2 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 218 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 218 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 218 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 59 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 146 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 81 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 218 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 218 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 60 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 218 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 218 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 218 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 73 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 73 bp overlap