Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

ASCL1 2 datasets

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 188 bp overlap

ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 160 bp overlap

ASXL3 1 dataset

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 492 bp overlap

Ascl2 2 datasets

Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap

Motif DE_72h DE_72h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 2 datasets

Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap

Motif DE_72h DE_72h-BHLHE22_MA1635.2 6 bp overlap

BRD4 4 datasets

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 553 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 355 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 858 bp overlap

ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 160 bp overlap

CREB1 3 datasets

ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 150 bp overlap

ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 85 bp overlap

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 53 bp overlap

CRX 1 dataset

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 214 bp overlap

CTCF 1 dataset

ChIP HT-1080 GSE135580.CTCF.HT-1080 356 bp overlap

EOMES 2 datasets

ChIP hESC GSE26097.EOMES.hESC 235 bp overlap

ChIP hESC GSE26097.EOMES.hESC 322 bp overlap

EZH2_phosphoT487 1 dataset

ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 255 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 929 bp overlap

ChIP DE DE-FOXA2-2 896 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 973 bp overlap

ChIP DE DE-GATA4-2 975 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 843 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 928 bp overlap

ChIP DE DE-GATA6-2 964 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 856 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 336 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 375 bp overlap

KLF9 1 dataset

ChIP GBM1A GSE62211.KLF9.GBM1A 253 bp overlap

MAX 3 datasets

ChIP NCI-H128 GSE41105.MAX.NCI-H128 190 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 319 bp overlap

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 296 bp overlap

MED1 1 dataset

ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 244 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 379 bp overlap

MYC 2 datasets

ChIP NCI-H128 GSE41105.MYC.NCI-H128 293 bp overlap

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 334 bp overlap

MYOD1 1 dataset

ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 225 bp overlap

MYOG 2 datasets

Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap

Motif DE_72h DE_72h-MYOG_MA0500.3 8 bp overlap

NANOG 3 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 210 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 869 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 471 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 714 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 387 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 514 bp overlap

NEUROG2 1 dataset

ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 195 bp overlap

Neurod2 2 datasets

Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap

Motif DE_72h DE_72h-Neurod2_MA1993.2 6 bp overlap

OSR2 1 dataset

ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap

Olig2 2 datasets

Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap

Motif DE_72h DE_72h-Olig2_MA1997.2 6 bp overlap

Prdm5 1 dataset

Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap

SIX1 2 datasets

Motif DE_60h DE_60h-SIX1_MA1118.2 9 bp overlap

Motif DE_72h DE_72h-SIX1_MA1118.2 9 bp overlap

SIX2 5 datasets

Motif DE_60h DE_60h-SIX2_MA1119.2 11 bp overlap

Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap

ChIP HEK GSE73865.SIX2.HEK 332 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 200 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 376 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 261 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 288 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 539 bp overlap

Stat4 2 datasets

Motif DE_60h DE_60h-Stat4_MA0518.2 10 bp overlap

Motif DE_72h DE_72h-Stat4_MA0518.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 404 bp overlap

Tcf12 2 datasets

Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap

Motif DE_72h DE_72h-Tcf12_MA0521.3 6 bp overlap

Twist2 2 datasets

Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap

Motif DE_72h DE_72h-Twist2_MA0633.3 6 bp overlap

ZBTB18 2 datasets

Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap

Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap

Genome Browser