chr3 : 98,326,618 98,327,012
394 bp 27 TFs 1 linked gene
This 394 bp open chromatin element is linked to ENSG00000289509 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000289509 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:98,321,618 – 98,332,012
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 216 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 313 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 190 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 70 bp overlap
CBX5 1 dataset
ChIP GM12878 ENCFF542UDC 214 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 211 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 62 bp overlap
ETV6 1 dataset
ChIP GM12878 ENCFF105ZMI 53 bp overlap
GATA6 1 dataset
ChIP DE_D1 S14-DE-d1-GATA6-exp1 275 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 109 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 70 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 95 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 124 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 118 bp overlap
MYB 1 dataset
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 111 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 223 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 392 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 394 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 394 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 384 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 246 bp overlap
ChIP hESC GSE18292.NANOG.hESC 132 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 288 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 95 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 112 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 121 bp overlap
POU5F1 4 datasets
ChIP H1 ENCFF698ZAP 199 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 394 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 108 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 299 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 180 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 55 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 332 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 394 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 394 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 394 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 394 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 394 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 109 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 191 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 255 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 166 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 249 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 289 bp overlap