chr3 : 95,343,356 95,343,522
166 bp 23 TFs 0 linked genes
This 166 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:95,338,356 – 95,348,522
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRD4 9 datasets
ChIP HT29 GSE73319.BRD4.HT29 99 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 166 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 166 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 166 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 166 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 166 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 166 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 166 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 166 bp overlap
CDK9 3 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 130 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 166 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 157 bp overlap
CDX2 4 datasets
ChIP LS180 GSE31939.CDX2.LS180 166 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 166 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 166 bp overlap
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 166 bp overlap
CREB1 2 datasets
ChIP LNCaP-abl_SHCTR GSE63034.CREB1.LNCaP-abl_SHCTR 166 bp overlap
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 166 bp overlap
CTCF 8 datasets
ChIP Peyer's patch ENCFF701KWW 166 bp overlap
ChIP Peyer's patch ENCFF746TCR 166 bp overlap
ChIP Peyer's patch ENCFF828IDE 166 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 141 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 166 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 166 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 166 bp overlap
ChIP transverse colon ENCFF749DPF 166 bp overlap
ERG 3 datasets
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 68 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 166 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 113 bp overlap
FOXA1 1 dataset
ChIP LS180 GSE140533.FOXA1.LS180 105 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 63 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 63 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 166 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-2 161 bp overlap
ChIP foregut GSE117136.GATA4.foregut 166 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 166 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 166 bp overlap
GATA6 6 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 166 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 166 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 148 bp overlap
ChIP foregut GSE117136.GATA6.foregut 166 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 166 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 166 bp overlap
HOXB13 4 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 166 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 146 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 166 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 165 bp overlap
JUND 1 dataset
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 166 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 166 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 166 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 147 bp overlap
MED1 4 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 166 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 150 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 166 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 166 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 123 bp overlap
NCOR2 2 datasets
ChIP LS180 GSE39277.NCOR2.LS180 91 bp overlap
ChIP LS180_125 GSE39277.NCOR2.LS180_125 100 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 166 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 166 bp overlap
POLR2A 2 datasets
ChIP transverse colon ENCFF607LKE 166 bp overlap
ChIP transverse colon ENCFF610RWV 97 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 166 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 166 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 166 bp overlap
SOX9 1 dataset
ChIP HT29 GSE63629.SOX9.HT29 166 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 133 bp overlap