chr1 : 54,766,744 54,767,058
314 bp 29 TFs 1 linked gene
This 314 bp open chromatin element is linked to PARS2 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PARS2 2.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:54,761,744 – 54,772,058
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 314 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 156 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 192 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 290 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 280 bp overlap
ChIP LCL GSE75503.EBF1.LCL 182 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 296 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 207 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 278 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 273 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 202 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 275 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 54 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 297 bp overlap
ChIP GM12878 ENCFF753XDO 314 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 195 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 248 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 187 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 221 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 232 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 188 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 314 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 194 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 115 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 314 bp overlap
REST 2 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 118 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 96 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 314 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 276 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 240 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 230 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 196 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 176 bp overlap
SP7 3 datasets
ChIP HEK293 ENCFF733RBE 314 bp overlap
ChIP HEK293 ENCFF733RBE 264 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 314 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 275 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 207 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 242 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 272 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 272 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 293 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 262 bp overlap