Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

27 transcription factors

BCOR 3 datasets

ChIP WA01 GSE104690.BCOR.WA01 407 bp overlap

ChIP WA01 GSE104690.BCOR.WA01 82 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 51 bp overlap

BRD4 4 datasets

ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 308 bp overlap

ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 92 bp overlap

ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 92 bp overlap

ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 138 bp overlap

ELL2 1 dataset

ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 149 bp overlap

ESRRA 2 datasets

ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 84 bp overlap

ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 51 bp overlap

EZH2 13 datasets

ChIP GM23248 ENCFF404ZHM 113 bp overlap

ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 150 bp overlap

ChIP GM23338 ENCFF613YON 251 bp overlap

ChIP H1 ENCFF232NZA 619 bp overlap

ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 619 bp overlap

ChIP HepG2 ENCFF912EIW 594 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 207 bp overlap

ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 252 bp overlap

ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 233 bp overlap

ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 207 bp overlap

ChIP neural ENCSR511CUH.EZH2.neural 381 bp overlap

ChIP neural progenitor cell ENCFF018MKA 619 bp overlap

ChIP neural progenitor cell ENCFF472NFV 619 bp overlap

EZH2_phosphoT487 1 dataset

ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 191 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 401 bp overlap

ChIP DE DE-FOXA2-2 449 bp overlap

GATA1 1 dataset

ChIP erythroid-progenitor_EPrec GSE124163.GATA1.erythroid-progenitor_EPrec 149 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 386 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-2 388 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 305 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 301 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 289 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 549 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 619 bp overlap

ChIP foregut_KO GSE117136.GATA6.foregut_KO 368 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 162 bp overlap

HNF1B 1 dataset

ChIP PDAC GSE64557.HNF1B.PDAC 339 bp overlap

IKZF3 1 dataset

ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 66 bp overlap

JARID2 2 datasets

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 456 bp overlap

ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 210 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 312 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 368 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 387 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 458 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 318 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 269 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 58 bp overlap

POU5F1 1 dataset

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 58 bp overlap

PRDM1 2 datasets

ChIP HEK293 ENCFF302TBP 421 bp overlap

ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap

RELA 2 datasets

ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 175 bp overlap

ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 172 bp overlap

RNF2 2 datasets

ChIP H1 ENCFF239FFS 109 bp overlap

ChIP HUES-64 GSE104059.RNF2.HUES-64 563 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 284 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 440 bp overlap

SMARCC1 1 dataset

ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 299 bp overlap

SOX2 1 dataset

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 89 bp overlap

SUZ12 1 dataset

ChIP H1 ENCFF881NFR 619 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 318 bp overlap

VDR 1 dataset

ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 83 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
GBX2		6.0 kb	Proximal	Proximity
GBX2-AS1		6.9 kb	Proximal	Proximity

Genome Browser