chr2 : 223,221,510 223,222,114
604 bp 37 TFs 0 linked genes
This 604 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:223,216,510 – 223,227,114
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
AR 3 datasets
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 414 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 159 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 194 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 390 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 186 bp overlap
BAF155 2 datasets
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 479 bp overlap
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 160 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 552 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ESRRA 1 dataset
ChIP BT-474 GSE81651.ESRRA.BT-474 329 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 604 bp overlap
FOXA1 8 datasets
ChIP 22Rv1_i176m_CST GSE123618.FOXA1.22Rv1_i176m_CST 223 bp overlap
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 236 bp overlap
ChIP MCF-7 ENCFF465LTH 251 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 118 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 307 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 377 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 191 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 341 bp overlap
FOXA2 6 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 293 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 355 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 540 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 545 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 604 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 195 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GATA2 1 dataset
ChIP VCaP GSE125236.GATA2.VCaP 194 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 287 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 430 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 423 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 482 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 418 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 422 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 266 bp overlap
GTF2B 1 dataset
ChIP HeLa_ASYNC GSE71848.GTF2B.HeLa_ASYNC 113 bp overlap
GTF2F1 2 datasets
ChIP H1 ENCFF399TGL 223 bp overlap
ChIP WA01 ENCSR000EBP.GTF2F1.WA01 126 bp overlap
HNF1B 2 datasets
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 443 bp overlap
ChIP PDAC GSE64557.HNF1B.PDAC 455 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 98 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 58 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 271 bp overlap
POLR2A 7 datasets
ChIP GM23338 ENCFF450WCS 211 bp overlap
ChIP H1 ENCFF566JSR 369 bp overlap
ChIP H1 ENCFF770YBQ 321 bp overlap
ChIP H1 ENCFF833NJP 199 bp overlap
ChIP body of pancreas ENCFF501FEC 296 bp overlap
ChIP body of pancreas ENCFF675RCN 358 bp overlap
ChIP body of pancreas ENCFF727UBE 142 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_DHT GSE123565.POU2F1.22Rv1_DHT 110 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 114 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 89 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 424 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 120 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 211 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 253 bp overlap
TBP 9 datasets
ChIP H1 ENCFF859IIO 114 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 167 bp overlap
ChIP hESC GSE122298.TBP.hESC 129 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 99 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 118 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 117 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 180 bp overlap
ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 175 bp overlap
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 144 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 232 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 154 bp overlap
ChIP NT2/D1 ENCFF999MII 214 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 188 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 191 bp overlap
ZNF425 1 dataset
ChIP WTC11 ENCFF359IXT 301 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap