chr2 : 142,129,062 142,129,450
388 bp 21 TFs 1 linked gene
This 388 bp open chromatin element is linked to LRP1B and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LRP1B 1.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:142,124,062 – 142,134,450
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
CTCF 15 datasets
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 141 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 208 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 208 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 205 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 152 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 134 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 118 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 255 bp overlap
ChIP neural cell ENCFF335ADI 299 bp overlap
ChIP thyroid gland ENCFF163TUI 107 bp overlap
ChIP thyroid gland ENCFF204HWS 59 bp overlap
ChIP thyroid gland ENCFF631QRY 167 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 122 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 101 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 71 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 178 bp overlap
EZH2 2 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 156 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 194 bp overlap
GATA6 3 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 259 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 264 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 285 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 198 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 178 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 91 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 388 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 388 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 388 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 183 bp overlap
RAD21 1 dataset
ChIP neural cell ENCFF564MOT 220 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 193 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 388 bp overlap
STAG1 5 datasets
ChIP HeLa GSE126990.STAG1.HeLa 286 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 286 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 91 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 105 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 54 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 256 bp overlap
ChIP HCT116 ENCFF038POZ 371 bp overlap
WDR5 1 dataset
ChIP breast-cancer_shLuc GSE113279.WDR5.breast-cancer_shLuc 388 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 271 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 388 bp overlap