chr2 : 106,882,804 106,883,095
291 bp 21 TFs 1 linked gene
This 291 bp open chromatin element is linked to ST6GAL2 and is bound by 21 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ST6GAL2 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:106,877,804 – 106,888,095
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
BCL11A 2 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 137 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 124 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 133 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 120 bp overlap
CTCF 166 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 291 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 291 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 219 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 291 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 169 bp overlap
ChIP A-549 ENCSR000BHV.CTCF.A-549 135 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 133 bp overlap
ChIP A549 ENCFF034FVO 102 bp overlap
ChIP A549 ENCFF182TCQ 108 bp overlap
ChIP A549 ENCFF434LUY 166 bp overlap
ChIP A549 ENCFF669BWC 158 bp overlap
ChIP AG04449 ENCFF248MBD 126 bp overlap
ChIP AG09309 ENCFF478XPS 172 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 150 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 150 bp overlap
ChIP GM23338 ENCFF772DML 61 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 291 bp overlap
ChIP H1 ENCFF414GZI 139 bp overlap
ChIP H1 ENCFF764RHO 189 bp overlap
ChIP H9 ENCFF152GTF 291 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 114 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 109 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 139 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 59 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 106 bp overlap
ChIP HFF-Myc ENCFF680WYR 189 bp overlap
ChIP HFFc6 ENCFF005CJI 291 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 206 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 128 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 145 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 181 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 184 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 92 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 95 bp overlap
ChIP HepG2 ENCFF194VBQ 205 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 77 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 104 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 104 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 190 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 211 bp overlap
ChIP MCF-7 ENCFF139NQI 179 bp overlap
ChIP MCF-7 ENCFF162GNE 179 bp overlap
ChIP MCF-7 ENCFF198DQX 154 bp overlap
ChIP MCF-7 ENCFF424NQR 163 bp overlap
ChIP MCF-7 ENCFF494VXA 154 bp overlap
ChIP MCF-7 ENCFF844STM 163 bp overlap
ChIP MCF-7 ENCFF954TUV 157 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 167 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 250 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 142 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 123 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 162 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 216 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 119 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 115 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 198 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 178 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 159 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 131 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 254 bp overlap
ChIP NPC GSE115407.CTCF.NPC 127 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 200 bp overlap
ChIP PC-3 ENCFF487TUI 189 bp overlap
ChIP PC-3 ENCFF487TUI 291 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 291 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 291 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 258 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 194 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 140 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 291 bp overlap
ChIP SK-N-SH ENCFF575DMG 242 bp overlap
ChIP SK-N-SH ENCFF731NJX 168 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 291 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 214 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 114 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 164 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 156 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 154 bp overlap
ChIP VCaP ENCFF858YQT 291 bp overlap
ChIP VCaP ENCFF858YQT 291 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 271 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 120 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 140 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 85 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 119 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 153 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 291 bp overlap
ChIP ascending aorta ENCFF451CCT 291 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 162 bp overlap
ChIP ascending-aorta ENCSR555DCD.CTCF.ascending-aorta 161 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 86 bp overlap
ChIP brain ENCFF067KUH 291 bp overlap
ChIP brain ENCFF163BBN 291 bp overlap
ChIP brain ENCFF685VRG 291 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 177 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 179 bp overlap
ChIP chondrocyte ENCFF134ORZ 291 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 195 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 151 bp overlap
ChIP coronary artery ENCFF483TFF 289 bp overlap
ChIP coronary-artery ENCSR175FLL.CTCF.coronary-artery 291 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 249 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 109 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 110 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 127 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 117 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277YTN 291 bp overlap
ChIP endodermal cell ENCFF471YCZ 127 bp overlap
ChIP endodermal cell ENCFF471YCZ 275 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 266 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 229 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 167 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 182 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 113 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 138 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 175 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 199 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 98 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 111 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 65 bp overlap
ChIP fibroblast_PEDAL_DIGIT_SKIN ENCSR000DPP.CTCF.fibroblast_PEDAL_DIGIT_SKIN 87 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 121 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 121 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 177 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 200 bp overlap
ChIP heart left ventricle ENCFF244ZHV 261 bp overlap
ChIP heart left ventricle ENCFF354HOQ 247 bp overlap
ChIP heart right ventricle ENCFF027ORH 280 bp overlap
ChIP hepatocyte ENCFF263BLJ 282 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 165 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 147 bp overlap
ChIP islet ERP004003.CTCF.islet 98 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 202 bp overlap
ChIP left ventricle myocardium inferior ENCFF161DPW 280 bp overlap
ChIP myotube ENCFF981UHL 183 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 132 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 182 bp overlap
ChIP neural progenitor cell ENCFF420RBO 149 bp overlap
ChIP neural progenitor cell ENCFF420RBO 246 bp overlap
ChIP neural progenitor cell ENCFF581WPG 291 bp overlap
ChIP neural progenitor cell ENCFF581WPG 291 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 211 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 148 bp overlap
ChIP osteoblast ENCFF491ZJZ 251 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 258 bp overlap
ChIP osteocyte ENCFF929FPD 206 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 183 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 152 bp overlap
ChIP retina_AB1-FW14 GSE86981.CTCF.retina_AB1-FW14 254 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 291 bp overlap
ChIP retina_AB1-FW18 GSE86981.CTCF.retina_AB1-FW18 225 bp overlap
ChIP retina_AB1-FW23 GSE86981.CTCF.retina_AB1-FW23 251 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 291 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 164 bp overlap
ChIP smooth muscle cell ENCFF656FBT 274 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 255 bp overlap
ChIP testis ENCFF919VBQ 287 bp overlap
ChIP testis ENCSR753RME.CTCF.testis 291 bp overlap
ChIP thyroid gland ENCFF163TUI 279 bp overlap
ChIP thyroid gland ENCFF204HWS 242 bp overlap
ChIP thyroid gland ENCFF300RYK 276 bp overlap
ChIP thyroid gland ENCFF631QRY 148 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 235 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 234 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 291 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 291 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 134 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 177 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 197 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 201 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 204 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 211 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 183 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 189 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 192 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 170 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 188 bp overlap
GATA6 1 dataset
ChIP DE DE-GATA6-2 229 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 244 bp overlap
MAX 1 dataset
ChIP A-549 ENCSR000BTJ.MAX.A-549 191 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 147 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 246 bp overlap
RAD21 27 datasets
ChIP A-549 ENCSR000DYE.RAD21.A-549 197 bp overlap
ChIP A-549 ENCSR000BUC.RAD21.A-549 245 bp overlap
ChIP A549 ENCFF047SFC 139 bp overlap
ChIP A549 ENCFF264AHX 210 bp overlap
ChIP A549 ENCFF264AHX 247 bp overlap
ChIP A549 ENCFF777QNW 166 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 291 bp overlap
ChIP H1 ENCFF698EWO 63 bp overlap
ChIP H1 ENCFF967OJF 176 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 154 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 74 bp overlap
ChIP MCF-7 ENCFF724VCQ 171 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 160 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 199 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 130 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 161 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 113 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 157 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 267 bp overlap
ChIP SK-N-SH ENCFF747MAS 126 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 211 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 138 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 126 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 78 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 92 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 209 bp overlap
ChIP neural cell ENCFF564MOT 102 bp overlap
SIN3A 1 dataset
ChIP A-549 ENCSR513XQX.SIN3A.A-549 209 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 207 bp overlap
SMC3 5 datasets
ChIP A-549 ENCSR481YWD.SMC3.A-549 167 bp overlap
ChIP A549 ENCFF079FKB 170 bp overlap
ChIP A549 ENCFF747SCJ 153 bp overlap
ChIP SK-N-SH ENCFF791WFB 149 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 160 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 138 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 291 bp overlap
STAG1 5 datasets
ChIP HeLa GSE126990.STAG1.HeLa 137 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 137 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 209 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 180 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 133 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 173 bp overlap