Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

22 transcription factors

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 170 bp overlap

BRD4 3 datasets

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 253 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 291 bp overlap

ChIP hESC GSE33281.BRD4.hESC 75 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 148 bp overlap

CTCF 46 datasets

ChIP BE2C ENCFF757SRF 198 bp overlap

ChIP BE2C ENCSR000DQD.CTCF.BE2C 129 bp overlap

ChIP GM23338 ENCFF772DML 60 bp overlap

ChIP H1 ENCFF414GZI 172 bp overlap

ChIP H1 ENCFF764RHO 191 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 155 bp overlap

ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 181 bp overlap

ChIP IMR-90 GSE43070.CTCF.IMR-90 139 bp overlap

ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 134 bp overlap

ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 113 bp overlap

ChIP NB69 GSE101295.CTCF.NB69 175 bp overlap

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 244 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 95 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 162 bp overlap

ChIP WERI-Rb-1 ENCFF349QKF 154 bp overlap

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 152 bp overlap

ChIP astrocyte of the cerebellum ENCFF511OCS 345 bp overlap

ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 215 bp overlap

ChIP brain ENCFF099ASU 412 bp overlap

ChIP brain ENCFF163BBN 358 bp overlap

ChIP choroid plexus epithelial cell ENCFF407YNR 216 bp overlap

ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 161 bp overlap

ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 208 bp overlap

ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 237 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 238 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 258 bp overlap

ChIP endodermal cell ENCFF471YCZ 116 bp overlap

ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 102 bp overlap

ChIP hepatocyte ENCFF263BLJ 217 bp overlap

ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 176 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 217 bp overlap

ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 118 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 142 bp overlap

ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 155 bp overlap

ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 182 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 155 bp overlap

ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 121 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 154 bp overlap

ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 146 bp overlap

ChIP islet ERP004003.CTCF.islet 157 bp overlap

ChIP neural ENCSR822CEA.CTCF.neural 269 bp overlap

ChIP neuron GSE115407.CTCF.neuron 355 bp overlap

ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 167 bp overlap

ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 300 bp overlap

ChIP tibial-nerve ENCSR793YAD.CTCF.tibial-nerve 187 bp overlap

ChIP tibial-nerve ENCSR875NEW.CTCF.tibial-nerve 163 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 242 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-1 260 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-2 378 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 260 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 286 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 265 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 414 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 607 bp overlap

ChIP foregut GSE117136.GATA6.foregut 264 bp overlap

JUN 2 datasets

ChIP DE_D1 S13-DE-d1-JUN-exp1 304 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 255 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 141 bp overlap

MED1 1 dataset

ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 139 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap

PBX1 1 dataset

Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 166 bp overlap

RAD21 16 datasets

ChIP H1 ENCFF698EWO 94 bp overlap

ChIP H1 ENCFF967OJF 212 bp overlap

ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 183 bp overlap

ChIP HCT116 ENCFF568PEO 245 bp overlap

ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 151 bp overlap

ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 106 bp overlap

ChIP WA09 GSE105028.RAD21.WA09 221 bp overlap

ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 192 bp overlap

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 146 bp overlap

ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 155 bp overlap

ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 172 bp overlap

ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 141 bp overlap

ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 163 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 172 bp overlap

ChIP neural ENCSR198ZYJ.RAD21.neural 309 bp overlap

ChIP neural cell ENCFF564MOT 368 bp overlap

RELA 1 dataset

ChIP KB GSE52469.RELA.KB 172 bp overlap

SMAD1 1 dataset

ChIP BG03 GSE36578.SMAD1.BG03 102 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 213 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 122 bp overlap

ZNF257 1 dataset

Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap

ZNF736 1 dataset

ChIP HEK293T GSE78099.ZNF736.HEK293T 163 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Genome Browser