chr2 : 34,729,942 34,730,127
185 bp 27 TFs 1 linked gene
This 185 bp open chromatin element is linked to LINC01320 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01320 4.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:34,724,942 – 34,735,127
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
AR 36 datasets
ChIP 22Rv1_R1881 GSE80742.AR.22Rv1_R1881 184 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 77 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 119 bp overlap
ChIP LNCaP_Bag-1L_KO_DHT GSE89938.AR.LNCaP_Bag-1L_KO_DHT 61 bp overlap
ChIP LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h GSE89938.AR.LNCaP_Bag1L_KO_Bag1L_Rescue_DHT_4h 77 bp overlap
ChIP LNCaP_DHT GSE92347.AR.LNCaP_DHT 72 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 98 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 62 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 156 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 82 bp overlap
ChIP VCaP GSE83650.AR.VCaP 109 bp overlap
ChIP VCaP GSE98809.AR.VCaP 109 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 137 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 175 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 185 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 185 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 185 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 185 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 185 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 73 bp overlap
ChIP VCaP_R1881 GSE79128.AR.VCaP_R1881 185 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 119 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 114 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 108 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 185 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 185 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 185 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 181 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 185 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 117 bp overlap
ChIP prostate GSE56288.AR.prostate 86 bp overlap
ChIP prostate-cancer_1335 GSE118845.AR.prostate-cancer_1335 103 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 98 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 185 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 144 bp overlap
ChIP prostate_1853_T GSE130408.AR.prostate_1853_T 78 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 115 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 86 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 141 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 185 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 149 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 185 bp overlap
ChIP neural cell ENCFF442QNK 185 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 73 bp overlap
FOXA1 1 dataset
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 56 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 185 bp overlap
ChIP DE DE-FOXA2-2 185 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 91 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 185 bp overlap
ChIP DE DE-GATA4-2 185 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 185 bp overlap
ChIP DE DE-GATA6-2 185 bp overlap
HNF4G 1 dataset
ChIP 22Rv1 GSE85558.HNF4G.22Rv1 67 bp overlap
HOXB13 7 datasets
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 57 bp overlap
ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 133 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 120 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 176 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 104 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 156 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 62 bp overlap
MED1 1 dataset
ChIP VCaP_DHT GSE125245.MED1.VCaP_DHT 138 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 185 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 154 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 185 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 185 bp overlap
RAD21 1 dataset
ChIP neural cell ENCFF564MOT 185 bp overlap
REST 3 datasets
ChIP neural ENCSR000BTV.REST.neural 185 bp overlap
ChIP neural cell ENCFF882LXX 114 bp overlap
ChIP neural cell ENCFF882LXX 185 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 185 bp overlap
SMARCA4 3 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 185 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 185 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 185 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 185 bp overlap
ChIP NPC GSE122631.SOX2.NPC 185 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 185 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 185 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 185 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 185 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 135 bp overlap