Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

41 transcription factors

BARX1 2 datasets

Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap

Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap

BSX 2 datasets

Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap

Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap

DLX1 2 datasets

Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap

Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap

DLX6 2 datasets

Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap

Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap

Dlx3 2 datasets

Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap

Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap

Dlx4 2 datasets

Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap

Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap

ESR2 1 dataset

Motif DE_48h DE_48h-ESR2_MA0258.2 15 bp overlap

EWSR1-FLI1 2 datasets

Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap

Motif DE_60h DE_60h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 796 bp overlap

ChIP DE DE-FOXA2-2 387 bp overlap

ChIP DE DE-FOXA2-2 286 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 785 bp overlap

ChIP DE DE-GATA4-2 796 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 613 bp overlap

ChIP DE DE-GATA6-2 752 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 727 bp overlap

GBX2 2 datasets

Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap

Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap

HESX1 2 datasets

Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap

Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap

HOXA7 2 datasets

Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap

Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap

IRF7 2 datasets

Motif DE_48h DE_48h-IRF7_MA0772.2 13 bp overlap

Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap

ISL2 2 datasets

Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap

Motif DE_60h DE_60h-ISL2_MA0914.2 6 bp overlap

LBX2 2 datasets

Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap

Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap

LHX2 2 datasets

Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap

Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap

MSX1 2 datasets

Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap

Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap

MSX2 2 datasets

Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap

Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap

Msx3 2 datasets

Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap

Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap

NR6A1 2 datasets

Motif DE_48h DE_48h-NR6A1_MA1541.2 14 bp overlap

Motif DE_60h DE_60h-NR6A1_MA1541.2 14 bp overlap

Nobox 2 datasets

Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap

Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap

POU1F1 2 datasets

Motif DE_48h DE_48h-POU1F1_MA0784.3 14 bp overlap

Motif DE_60h DE_60h-POU1F1_MA0784.3 14 bp overlap

POU2F1 2 datasets

Motif DE_48h DE_48h-POU2F1_MA0785.2 9 bp overlap

Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_48h DE_48h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif DE_60h DE_60h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 2 datasets

Motif DE_48h DE_48h-POU2F2_MA0507.3 13 bp overlap

Motif DE_60h DE_60h-POU2F2_MA0507.3 13 bp overlap

POU3F3 2 datasets

Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap

Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap

POU3F4 2 datasets

Motif DE_48h DE_48h-POU3F4_MA0789.1 9 bp overlap

Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap

POU5F1B 2 datasets

Motif DE_48h DE_48h-POU5F1B_MA0792.1 9 bp overlap

Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap

PPARG 2 datasets

Motif DE_48h DE_48h-PPARG_MA0066.2 19 bp overlap

Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap

RAX 2 datasets

Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap

Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap

RFX7 1 dataset

Motif DE_48h DE_48h-RFX7_MA1554.2 8 bp overlap

Rfx6 1 dataset

Motif DE_48h DE_48h-Rfx6_MA1724.2 9 bp overlap

SATB1 2 datasets

Motif DE_48h DE_48h-SATB1_MA1963.2 7 bp overlap

Motif DE_60h DE_60h-SATB1_MA1963.2 7 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 264 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 535 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 685 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 427 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 466 bp overlap

SP5 2 datasets

Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap

Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap

ZNF140 2 datasets

Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap

Motif DE_60h DE_60h-ZNF140_MA1589.2 19 bp overlap

Genome Browser