chrX : 145,923,479 – 145,923,675
196 bp 24 TFs 0 linked genes
This 196 bp open chromatin element has no linked target genes and is bound by 24 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:145,918,479 – 145,928,675
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 196 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CTCF 95 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 196 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 196 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 172 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 196 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 129 bp overlap
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DOHH2 ENCFF637WNW 196 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 196 bp overlap
ChIP GM23338 ENCFF531QOI 189 bp overlap
ChIP GM23338 ENCFF772DML 142 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 196 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 196 bp overlap
ChIP H1 ENCFF230QSV 162 bp overlap
ChIP H1 ENCFF414GZI 196 bp overlap
ChIP H1 ENCFF764RHO 108 bp overlap
ChIP H9 ENCFF152GTF 196 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 196 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 196 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 196 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 196 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 196 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 196 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 196 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 196 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 196 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 196 bp overlap
ChIP HEK293 ENCFF498RMM 196 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 179 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 94 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 196 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 157 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 157 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 164 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 132 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 148 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 107 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 100 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 167 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 123 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 196 bp overlap
ChIP MCF-7 ENCFF198DQX 196 bp overlap
ChIP MCF-7 ENCFF424NQR 178 bp overlap
ChIP MCF-7 ENCFF494VXA 196 bp overlap
ChIP MCF-7 ENCFF844STM 180 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 164 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 180 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 115 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 116 bp overlap
ChIP NCI-H929 ENCFF305JAB 196 bp overlap
ChIP NCI-H929 ENCFF305JAB 179 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 196 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 196 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 196 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 179 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 196 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 196 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 196 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 173 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 189 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 173 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 196 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 119 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 151 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 178 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-0h 130 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 142 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 175 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 172 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 175 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 120 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 173 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 183 bp overlap
ChIP endodermal cell ENCFF471YCZ 196 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 196 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 172 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 156 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 172 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 196 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 190 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 196 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 196 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 177 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 146 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 171 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 189 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 194 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 189 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 196 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 196 bp overlap
ChIP neural progenitor cell ENCFF420RBO 126 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 196 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 179 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 156 bp overlap
FOSL1::JUND 1 dataset
Motif DE_12h DE_12h-FOSL1JUND_MA1143.2 9 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MYC 1 dataset
ChIP GEN2-2 GSE70275.MYC.GEN2-2 92 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 98 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
RAD21 18 datasets
ChIP H1 ENCFF698EWO 141 bp overlap
ChIP H1 ENCFF967OJF 196 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 196 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 196 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 196 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 196 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 136 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 196 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 186 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 196 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 196 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 173 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 114 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 196 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 196 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 163 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 196 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
RARA::RXRG 1 dataset
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 126 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 139 bp overlap
SMC1 1 dataset
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 155 bp overlap
SMC3 5 datasets
ChIP GP5D GSE51234.SMC3.GP5D 196 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 136 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 136 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 136 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 188 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
ZNF417 1 dataset
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
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