chrX : 140,501,358 140,501,578
220 bp 24 TFs 1 linked gene
This 220 bp open chromatin element is linked to SOX3 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SOX3 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:140,496,358 – 140,506,578
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 126 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 220 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 134 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 160 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 176 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 153 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 219 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 111 bp overlap
EZH2 11 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 220 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 202 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 185 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 124 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 220 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 220 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 76 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 220 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 220 bp overlap
ChIP keratinocyte ENCFF070STK 176 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 220 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 220 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 106 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 220 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 220 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 220 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 146 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 220 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 209 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 169 bp overlap
RNF2 3 datasets
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 189 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 192 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 52 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 147 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 153 bp overlap
SUZ12 4 datasets
ChIP H1 ENCFF881NFR 102 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 220 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 192 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 220 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 78 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 78 bp overlap