Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

Arid3a 2 datasets

Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap

Motif DE_72h DE_72h-Arid3a_MA0151.1 6 bp overlap

BACH1 1 dataset

Motif DE_60h DE_60h-BACH1_MA1633.2 9 bp overlap

EOMES 2 datasets

Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 132 bp overlap

FOS::JUN 1 dataset

Motif DE_60h DE_60h-FOSJUN_MA0099.4 9 bp overlap

FOS::JUNB 1 dataset

Motif DE_60h DE_60h-FOSJUNB_MA1134.2 9 bp overlap

FOS::JUND 1 dataset

Motif DE_60h DE_60h-FOSJUND_MA1141.2 9 bp overlap

FOSB::JUNB 1 dataset

Motif DE_60h DE_60h-FOSBJUNB_MA1135.2 9 bp overlap

FOSL1 1 dataset

Motif DE_60h DE_60h-FOSL1_MA0477.3 9 bp overlap

FOSL1::JUN 1 dataset

Motif DE_60h DE_60h-FOSL1JUN_MA1128.2 9 bp overlap

FOSL1::JUNB 1 dataset

Motif DE_60h DE_60h-FOSL1JUNB_MA1137.2 9 bp overlap

FOSL1::JUND 1 dataset

Motif DE_60h DE_60h-FOSL1JUND_MA1142.2 8 bp overlap

FOSL2 1 dataset

Motif DE_60h DE_60h-FOSL2_MA0478.2 10 bp overlap

FOSL2::JUN 1 dataset

Motif DE_60h DE_60h-FOSL2JUN_MA1130.2 9 bp overlap

FOSL2::JUNB 1 dataset

Motif DE_60h DE_60h-FOSL2JUNB_MA1138.2 9 bp overlap

FOSL2::JUND 1 dataset

Motif DE_60h DE_60h-FOSL2JUND_MA1144.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 711 bp overlap

ChIP DE DE-FOXA2-2 721 bp overlap

GATA1 2 datasets

Motif DE_48h DE_48h-GATA1_MA0035.5 7 bp overlap

Motif DE_60h DE_60h-GATA1_MA0035.5 7 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 825 bp overlap

ChIP DE DE-GATA4-2 816 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 810 bp overlap

ChIP DE DE-GATA6-2 849 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 666 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 395 bp overlap

IKZF2 2 datasets

Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap

Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap

IRF2 1 dataset

Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap

JUNB 1 dataset

Motif DE_60h DE_60h-JUNB_MA0490.3 9 bp overlap

JUND 1 dataset

Motif DE_60h DE_60h-JUND_MA0491.3 9 bp overlap

Jun 1 dataset

Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap

KLF17 2 datasets

Motif DE_48h DE_48h-KLF17_MA1514.2 14 bp overlap

Motif DE_60h DE_60h-KLF17_MA1514.2 14 bp overlap

MGA 1 dataset

Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap

NFATC3 3 datasets

Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap

Nfatc1 3 datasets

Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap

RUNX3 1 dataset

Motif DE_60h DE_60h-RUNX3_MA0684.3 8 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 292 bp overlap

SMAD2_3 3 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 217 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 295 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 214 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 376 bp overlap

SPIB 2 datasets

Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap

Motif DE_72h DE_72h-SPIB_MA0081.3 13 bp overlap

TBR1 1 dataset

Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap

TBX21 1 dataset

Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap

TBX4 1 dataset

Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap

ZFP42 1 dataset

Motif DE_60h DE_60h-ZFP42_MA1651.2 13 bp overlap

ZKSCAN5 1 dataset

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF281 2 datasets

Motif DE_48h DE_48h-ZNF281_MA1630.3 10 bp overlap

Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap

ZNF324 2 datasets

Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap

Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap

Zfp335 3 datasets

Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap

Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap

Genome Browser