chrX : 122,238,428 122,239,070
642 bp 44 TFs 1 linked gene
This 642 bp open chromatin element is linked to ENSG00000280142 and is bound by 44 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000280142 2.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:122,233,428 – 122,244,070
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 130 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 381 bp overlap
BRD4 1 dataset
ChIP keratinocyte GSE140992.BRD4.keratinocyte 581 bp overlap
CEBPA 1 dataset
Motif DE_48h DE_48h-CEBPA_MA0102.5 10 bp overlap
CEBPD 1 dataset
Motif DE_48h DE_48h-CEBPD_MA0836.3 8 bp overlap
CREBBP 1 dataset
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 191 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 144 bp overlap
FOS 1 dataset
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 132 bp overlap
FOSL2 1 dataset
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 201 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 354 bp overlap
ChIP DE DE-FOXA2-2 289 bp overlap
FOXP2 1 dataset
Motif DE_48h DE_48h-FOXP2_MA0593.2 9 bp overlap
Foxl2 1 dataset
Motif DE_48h DE_48h-Foxl2_MA1607.2 10 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 441 bp overlap
ChIP DE DE-GATA4-2 591 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 317 bp overlap
ChIP foregut GSE117136.GATA4.foregut 450 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 527 bp overlap
ChIP DE DE-GATA6-2 639 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 553 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 279 bp overlap
ChIP foregut GSE117136.GATA6.foregut 545 bp overlap
MAFF 1 dataset
Motif DE_48h DE_48h-MAFF_MA0495.4 11 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 194 bp overlap
MYB 1 dataset
Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap
MYC 2 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 105 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 120 bp overlap
MYF6 2 datasets
Motif DE_48h DE_48h-MYF6_MA0667.1 10 bp overlap
Motif DE_48h DE_48h-MYF6_MA0667.1 10 bp overlap
Mafb 1 dataset
Motif DE_48h DE_48h-Mafb_MA0117.3 11 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 53 bp overlap
NRL 1 dataset
Motif DE_48h DE_48h-NRL_MA0842.3 12 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 407 bp overlap
ChIP H1 ENCFF566JSR 589 bp overlap
RELA 1 dataset
ChIP HDF_NUTLIN GSE77225.RELA.HDF_NUTLIN 116 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 248 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 536 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 398 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 322 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 362 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 305 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 113 bp overlap
TP53 32 datasets
ChIP A-498_2h_4GY GSE100292.TP53.A-498_2h_4GY 112 bp overlap
ChIP GM00011 GSE55727.TP53.GM00011 569 bp overlap
ChIP GM06170 GSE55727.TP53.GM06170 520 bp overlap
ChIP H9 GSE142050.TP53.H9 444 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 474 bp overlap
ChIP H9_ectoderm_IFI16 GSE142050.TP53.H9_ectoderm_IFI16 205 bp overlap
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 292 bp overlap
ChIP HCT-116_Nutlin3a GSE125927.TP53.HCT-116_Nutlin3a 354 bp overlap
ChIP HCT-116_nutlin GSE86164.TP53.HCT-116_nutlin 316 bp overlap
ChIP LOX-IMVI_2h_4GY GSE100292.TP53.LOX-IMVI_2h_4GY 313 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP53.MCF-10A_Nutlin3A 642 bp overlap
ChIP MCF-7_2-5h_IR_10Gy GSE100099.TP53.MCF-7_2-5h_IR_10Gy 299 bp overlap
ChIP MCF-7_7-5h_IR_10Gy GSE100099.TP53.MCF-7_7-5h_IR_10Gy 268 bp overlap
ChIP MCF-7_7-5h_IR_10Gy_Nutlin GSE100099.TP53.MCF-7_7-5h_IR_10Gy_Nutlin 493 bp overlap
ChIP MCF-7_nutlin GSE86164.TP53.MCF-7_nutlin 506 bp overlap
ChIP SJSA-1_nutlin GSE86164.TP53.SJSA-1_nutlin 225 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 379 bp overlap
ChIP U2OS_DMSO GSE46641.TP53.U2OS_DMSO 211 bp overlap
ChIP U2OS_DXR GSE46641.TP53.U2OS_DXR 201 bp overlap
ChIP U2OS_ETO GSE21939.TP53.U2OS_ETO 409 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 508 bp overlap
ChIP U2OS_UV_16H ERP004176.TP53.U2OS_UV_16H 251 bp overlap
ChIP U2OS_UV_8H ERP004176.TP53.U2OS_UV_8H 167 bp overlap
ChIP UO-31_2h_4GY GSE100292.TP53.UO-31_2h_4GY 325 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 307 bp overlap
ChIP keratinocyte GSE56674.TP53.keratinocyte 471 bp overlap
ChIP keratinocyte_ADRIA GSE56674.TP53.keratinocyte_ADRIA 289 bp overlap
ChIP keratinocyte_CISP GSE56674.TP53.keratinocyte_CISP 436 bp overlap
ChIP lymphocyte_116 GSE110368.TP53.lymphocyte_116 191 bp overlap
ChIP lymphocyte_116_DXR GSE110368.TP53.lymphocyte_116_DXR 226 bp overlap
ChIP lymphocyte_116_Nutlin GSE110368.TP53.lymphocyte_116_Nutlin 371 bp overlap
ChIP lymphocyte_45_DXR GSE110368.TP53.lymphocyte_45_DXR 249 bp overlap
TP63 11 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 315 bp overlap
ChIP HaCaT_caRAS_TGFB GSE60814.TP63.HaCaT_caRAS_TGFB 172 bp overlap
ChIP JHU-029 GSE88859.TP63.JHU-029 457 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 332 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 326 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 189 bp overlap
ChIP keratinocyte_CISP GSE56674.TP63.keratinocyte_CISP 216 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 186 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 186 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 302 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 201 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 178 bp overlap
Tcf21 1 dataset
Motif DE_48h DE_48h-Tcf21_MA0832.2 10 bp overlap
ZIM3 1 dataset
Motif DE_48h DE_48h-ZIM3_MA1709.2 11 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 152 bp overlap
ZNF317 1 dataset
Motif DE_48h DE_48h-ZNF317_MA1593.2 8 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 85 bp overlap
ZNF382 1 dataset
Motif DE_48h DE_48h-ZNF382_MA1594.1 24 bp overlap
ZNF677 1 dataset
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap