chrX : 112,223,278 112,223,574
296 bp 26 TFs 0 linked genes
This 296 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:112,218,278 – 112,228,574
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 122 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 178 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 246 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 137 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 296 bp overlap
GATA2 6 datasets
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 130 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 108 bp overlap
ChIP SK-N-SH ENCFF764OZD 292 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 157 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 209 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 207 bp overlap
GATA3 4 datasets
ChIP BE2C GSE65664.GATA3.BE2C 172 bp overlap
ChIP SH-SY5Y ENCFF475HYF 296 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 282 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 296 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 296 bp overlap
ChIP DE DE-GATA4-2 296 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 225 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 296 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 287 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 296 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 296 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 72 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 296 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 296 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 197 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 174 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 220 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 296 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 275 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 139 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 240 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 296 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 279 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 137 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 296 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 296 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 296 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 90 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 84 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 84 bp overlap