chr2 : 18,914,197 18,915,126
929 bp 41 TFs 0 linked genes
This 929 bp open chromatin element has no linked target genes and is bound by 41 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:18,909,197 – 18,920,126
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
41 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_60h DE_60h-ASCL1_MA1631.2 9 bp overlap
BARX2 1 dataset
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
CEBPD 1 dataset
Motif DE_60h DE_60h-CEBPD_MA0836.3 8 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 496 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 145 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 353 bp overlap
ChIP DE DE-FOXA2-2 443 bp overlap
FOXN3 1 dataset
Motif DE_60h DE_60h-FOXN3_MA1489.1 8 bp overlap
FOXP2 1 dataset
Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 129 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 570 bp overlap
ChIP DE DE-GATA4-2 924 bp overlap
ChIP foregut GSE117136.GATA4.foregut 490 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 482 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 513 bp overlap
GATA6 16 datasets
ChIP AGS GSE51705.GATA6.AGS 213 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 137 bp overlap
ChIP DE DE-GATA6-1 579 bp overlap
ChIP DE DE-GATA6-2 595 bp overlap
ChIP DE DE-GATA6-2 55 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 348 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 786 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 338 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 347 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 206 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 571 bp overlap
ChIP foregut GSE117136.GATA6.foregut 535 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 305 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 435 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 375 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 429 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 229 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 112 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
IRF7 1 dataset
Motif DE_60h DE_60h-IRF7_MA0772.2 13 bp overlap
Isl1 1 dataset
Motif DE_60h DE_60h-Isl1_MA1608.2 7 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 270 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 217 bp overlap
MYOD1 1 dataset
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
NR2F6 1 dataset
Motif DE_60h DE_60h-NR2F6_MA1539.1 15 bp overlap
Pax7 1 dataset
Motif DE_60h DE_60h-Pax7_MA0680.3 10 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 286 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 512 bp overlap
Rarg 1 dataset
Motif DE_60h DE_60h-Rarg_MA0860.1 17 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 423 bp overlap
SNAI2 1 dataset
Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 239 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 293 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 181 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Stat6 1 dataset
Motif DE_60h DE_60h-Stat6_MA0520.2 10 bp overlap
TCF4 1 dataset
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
THRB 1 dataset
Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap
TP53 1 dataset
Motif DE_60h DE_60h-TP53_MA0106.3 18 bp overlap
VENTX 1 dataset
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF574 1 dataset
Motif DE_60h DE_60h-ZNF574_MA1982.2 14 bp overlap