chr20 : 16,953,899 16,954,572
673 bp 58 TFs 0 linked genes
This 673 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:16,948,899 – 16,959,572
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
58 transcription factors
Source
Cell type
BARX1 2 datasets
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BSX 2 datasets
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CEBPD 1 dataset
Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 251 bp overlap
DLX1 2 datasets
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 2 datasets
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 2 datasets
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 2 datasets
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 78 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 186 bp overlap
GATA4 2 datasets
ChIP foregut GSE117136.GATA4.foregut 653 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 353 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 558 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 570 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 351 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 607 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 569 bp overlap
ChIP foregut GSE117136.GATA6.foregut 367 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 2 datasets
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HESX1 2 datasets
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 243 bp overlap
HOXA7 2 datasets
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HSF1 3 datasets
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 207 bp overlap
ChIP U2OS_HEAT GSE60984.HSF1.U2OS_HEAT 224 bp overlap
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 327 bp overlap
Hand1 1 dataset
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 655 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 638 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 2 datasets
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MSX1 2 datasets
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Msx3 2 datasets
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nobox 2 datasets
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 284 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 252 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
RAX 2 datasets
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
SMAD2 4 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 527 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 452 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 616 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 673 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 673 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 660 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 615 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 609 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 342 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 427 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap