chr20 : 12,317,817 12,318,313
496 bp 20 TFs 2 linked genes
This 496 bp open chromatin element is linked to ENSG00000235292 and ENSG00000230437 and is bound by 20 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
ENSG00000235292 at TSS At TSS Proximity
ENSG00000230437 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:12,312,817 – 12,323,313
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 237 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 405 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 255 bp overlap
FOXA1 3 datasets
ChIP LS180 GSE140533.FOXA1.LS180 181 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 160 bp overlap
ChIP liver ERP002306.FOXA1.liver 109 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 496 bp overlap
ChIP DE DE-FOXA2-2 496 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 167 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 134 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 496 bp overlap
ChIP DE DE-GATA4-2 496 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 196 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 311 bp overlap
ChIP DE DE-GATA6-1 109 bp overlap
ChIP DE DE-GATA6-2 496 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF354NRH 270 bp overlap
JUND 1 dataset
ChIP liver ENCSR837GTK.JUND.liver 160 bp overlap
MAX 1 dataset
ChIP liver ENCSR521IID.MAX.liver 162 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 227 bp overlap
NCOA1 1 dataset
ChIP MCF-7 ERP000901.NCOA1.MCF-7 126 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 172 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 161 bp overlap
REST 1 dataset
ChIP liver ENCSR867WPH.REST.liver 167 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 282 bp overlap
SETDB1 1 dataset
ChIP WN8532 GSE36579.SETDB1.WN8532 181 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 273 bp overlap
SP1 1 dataset
ChIP liver ENCFF597LFJ 309 bp overlap