chr2 : 13,515,114 13,515,790
676 bp 54 TFs 0 linked genes
This 676 bp open chromatin element has no linked target genes and is bound by 54 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:13,510,114 – 13,520,790
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
54 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_48h DE_48h-ASCL1_MA1631.2 9 bp overlap
ATF4 1 dataset
Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap
CEBPG 1 dataset
Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 299 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF346MCV 222 bp overlap
DMRTA1 1 dataset
Motif DE_48h DE_48h-DMRTA1_MA1707.2 10 bp overlap
EOMES 1 dataset
Motif DE_48h DE_48h-EOMES_MA0800.2 9 bp overlap
ESR1 1 dataset
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 131 bp overlap
FERD3L 2 datasets
Motif DE_48h DE_48h-FERD3L_MA1485.1 14 bp overlap
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
FIGLA 3 datasets
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_48h DE_48h-FIGLA_MA0820.2 6 bp overlap
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 438 bp overlap
ChIP DE DE-FOXA2-2 314 bp overlap
FOXH1 1 dataset
Motif DE_48h DE_48h-FOXH1_MA0479.2 8 bp overlap
Foxq1 1 dataset
Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 406 bp overlap
ChIP DE DE-GATA4-2 418 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 413 bp overlap
ChIP DE DE-GATA6-2 425 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 328 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 123 bp overlap
Hic1 1 dataset
Motif DE_48h DE_48h-Hic1_MA0739.2 8 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 676 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 643 bp overlap
Jun 1 dataset
Motif DE_48h DE_48h-Jun_MA0489.3 8 bp overlap
LIN54 1 dataset
Motif DE_48h DE_48h-LIN54_MA0619.2 7 bp overlap
MGA 1 dataset
Motif DE_48h DE_48h-MGA_MA0801.1 8 bp overlap
MYOD1 3 datasets
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
Motif DE_48h DE_48h-MYOD1_MA0499.3 9 bp overlap
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
NFIA 1 dataset
Motif DE_48h DE_48h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_48h DE_48h-NFIX_MA0671.2 6 bp overlap
NHLH2 2 datasets
Motif DE_48h DE_48h-NHLH2_MA1529.2 16 bp overlap
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
PKNOX2 2 datasets
Motif DE_48h DE_48h-PKNOX2_MA0783.1 12 bp overlap
Motif DE_60h DE_60h-PKNOX2_MA0783.1 12 bp overlap
Ptf1A 2 datasets
Motif DE_48h DE_48h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 261 bp overlap
SNAI2 2 datasets
Motif DE_48h DE_48h-SNAI2_MA0745.3 8 bp overlap
Motif DE_60h DE_60h-SNAI2_MA0745.3 8 bp overlap
SNAI3 2 datasets
Motif DE_48h DE_48h-SNAI3_MA1559.2 9 bp overlap
Motif DE_60h DE_60h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 240 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 226 bp overlap
SP5 1 dataset
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
TBR1 1 dataset
Motif DE_48h DE_48h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_48h DE_48h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_48h DE_48h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_48h DE_48h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_48h DE_48h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_48h DE_48h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_48h DE_48h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_48h DE_48h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_48h DE_48h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_48h DE_48h-TBX5_MA0807.1 8 bp overlap
TCF4 4 datasets
Motif DE_48h DE_48h-TCF4_MA0830.3 8 bp overlap
Motif DE_48h DE_48h-TCF4_MA0830.3 8 bp overlap
Motif DE_60h DE_60h-TCF4_MA0830.3 8 bp overlap
ChIP LS180_125 GSE31939.TCF4.LS180_125 78 bp overlap
THRB 1 dataset
Motif DE_48h DE_48h-THRB_MA1575.2 17 bp overlap
Tbx6 1 dataset
Motif DE_48h DE_48h-Tbx6_MA1567.3 9 bp overlap
VENTX 2 datasets
Motif DE_48h DE_48h-VENTX_MA0724.1 9 bp overlap
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
Yy1 1 dataset
Motif DE_48h DE_48h-Yy1_MA0095.4 8 bp overlap
ZEB1 3 datasets
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_48h DE_48h-ZEB1_MA0103.4 6 bp overlap
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF75A 1 dataset
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap