Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

28 transcription factors

CRX 4 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 188 bp overlap

ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 156 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 188 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 188 bp overlap

CTCF 2 datasets

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 186 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 188 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 188 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCFF528YED 56 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 188 bp overlap

ChIP DE DE-FOXA2-2 188 bp overlap

GATA3 1 dataset

ChIP Kelly GSE65664.GATA3.Kelly 157 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 188 bp overlap

ChIP DE DE-GATA4-2 188 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 188 bp overlap

ChIP DE DE-GATA6-2 188 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 188 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 177 bp overlap

HAND2 1 dataset

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 188 bp overlap

MAFG 1 dataset

ChIP K-562 ENCSR818DQV.MAFG.K-562 113 bp overlap

MAFK 1 dataset

ChIP A549 ENCFF371EPR 115 bp overlap

MEF2D 3 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 171 bp overlap

ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 66 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 166 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 181 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 188 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 188 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 188 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 188 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 188 bp overlap

NFE2 2 datasets

ChIP K-562 ENCSR552YGL.NFE2.K-562 99 bp overlap

ChIP K562 ENCFF163BSI 77 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 161 bp overlap

PAF1 1 dataset

ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 80 bp overlap

PHOX2B 1 dataset

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 155 bp overlap

POLR2A 3 datasets

ChIP HeLa-S3 ENCFF773DNG 131 bp overlap

ChIP K562 ENCFF215CWW 114 bp overlap

ChIP K562 ENCFF215CWW 139 bp overlap

RARB 1 dataset

ChIP A549 ENCFF837HCQ 79 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 188 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 188 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 176 bp overlap

SMAD5 1 dataset

ChIP K-562 ENCSR000FCD.SMAD5.K-562 68 bp overlap

STAT3 1 dataset

ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 106 bp overlap

SUPT5H 1 dataset

ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 68 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 155 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 97 bp overlap

Gene	Expression	Dist. to TSS	Distance	Link type
UQCRFS1		6.0 kb	Proximal	Proximity
UQCRFS1-DT		6.1 kb	Proximal	Proximity

Genome Browser