chr18 : 60,117,336 60,117,835
499 bp 45 TFs 0 linked genes
This 499 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:60,112,336 – 60,122,835
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
Arid3a 1 dataset
Motif DE_60h DE_60h-Arid3a_MA0151.1 6 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 284 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 337 bp overlap
ChIP DE DE-FOXA2-1 499 bp overlap
ChIP DE DE-FOXA2-2 499 bp overlap
FOXD3 1 dataset
Motif DE_72h DE_72h-FOXD3_MA0041.3 14 bp overlap
FOXF2 1 dataset
Motif DE_72h DE_72h-FOXF2_MA0030.2 9 bp overlap
FOXG1 1 dataset
Motif DE_72h DE_72h-FOXG1_MA0613.1 8 bp overlap
FOXH1 1 dataset
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
FOXK1 1 dataset
Motif DE_72h DE_72h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_72h DE_72h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_72h DE_72h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_72h DE_72h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_72h DE_72h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_72h DE_72h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_72h DE_72h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_72h DE_72h-Foxf1_MA1606.2 7 bp overlap
Foxo1 1 dataset
Motif DE_72h DE_72h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_72h DE_72h-Foxo3_MA0157.4 7 bp overlap
GATA2 3 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 499 bp overlap
ChIP DE DE-GATA4-2 499 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 445 bp overlap
ChIP foregut GSE117136.GATA4.foregut 499 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 499 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 374 bp overlap
GATA5 3 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 20 datasets
ChIP AGS GSE51705.GATA6.AGS 165 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 189 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 166 bp overlap
ChIP DE DE-GATA6-1 499 bp overlap
ChIP DE DE-GATA6-2 499 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 329 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 326 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 499 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 296 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 375 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 280 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 499 bp overlap
ChIP foregut GSE117136.GATA6.foregut 499 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 377 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 468 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 346 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 393 bp overlap
Gata3 3 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Gli1 1 dataset
Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif DE_60h DE_60h-Gli2_MA0734.4 9 bp overlap
HMBOX1 1 dataset
Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap
HNF1A 1 dataset
Motif DE_60h DE_60h-HNF1A_MA0046.3 13 bp overlap
HNF1B 2 datasets
Motif DE_60h DE_60h-HNF1B_MA0153.2 13 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 429 bp overlap
Hoxa13 1 dataset
Motif DE_72h DE_72h-Hoxa13_MA0650.4 8 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 286 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 328 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
PPARA::RXRA 2 datasets
Motif DE_60h DE_60h-PPARARXRA_MA1148.2 17 bp overlap
Motif DE_72h DE_72h-PPARARXRA_MA1148.2 17 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 499 bp overlap
TCF7L1 1 dataset
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TRPS1 3 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
VENTX 1 dataset
Motif DE_60h DE_60h-VENTX_MA0724.1 9 bp overlap
ZBTB24 1 dataset
Motif DE_72h DE_72h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7C 1 dataset
Motif DE_60h DE_60h-ZBTB7C_MA0695.2 8 bp overlap
ZIC1 1 dataset
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC5 1 dataset
Motif DE_60h DE_60h-ZIC5_MA1584.2 15 bp overlap
ZNF184 2 datasets
Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap
Motif DE_72h DE_72h-ZNF184_MA2120.1 13 bp overlap
ZNF354A 1 dataset
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
ZNF680 3 datasets
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
Motif DE_60h DE_60h-ZNF680_MA1729.2 11 bp overlap
Motif DE_72h DE_72h-ZNF680_MA1729.2 11 bp overlap