chr17 : 69,004,866 69,005,401
535 bp 18 TFs 1 linked gene
This 535 bp open chromatin element is linked to ABCA9-AS1 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ABCA9-AS1 153 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:68,999,866 – 69,010,401
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 182 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 133 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 159 bp overlap
BRD2 4 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 265 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 309 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 233 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD2.K-562_iBET-BD1-IFNG 201 bp overlap
BRD3 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 59 bp overlap
GATA6 1 dataset
ChIP YCC-3 GSE51705.GATA6.YCC-3 185 bp overlap
HDAC1 1 dataset
ChIP PC-3_GDC-resist GSE147455.HDAC1.PC-3_GDC-resist 135 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 207 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 73 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 358 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 257 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 240 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 225 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 279 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 335 bp overlap
ChIP WA01 GSE39096.YY1.WA01 175 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZFX 1 dataset
ChIP MCF-7 ENCFF009NAJ 406 bp overlap