chr17 : 35,061,034 35,061,342
308 bp 28 TFs 1 linked gene
This 308 bp open chromatin element is linked to RFFL and is bound by 28 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RFFL 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:35,056,034 – 35,066,342
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
28 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 308 bp overlap
ChIP K562 ENCFF938UXQ 308 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 229 bp overlap
ChIP K562 ENCFF963TXY 308 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 276 bp overlap
ChIP K562 ENCFF673OEZ 150 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 308 bp overlap
ChIP K562 ENCFF053BWO 308 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 308 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 299 bp overlap
ChIP DE DE-FOXA2-2 307 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 178 bp overlap
GATA4 5 datasets
ChIP A-549 GSE85002.GATA4.A-549 257 bp overlap
ChIP DE DE-GATA4-1 308 bp overlap
ChIP DE DE-GATA4-2 308 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 308 bp overlap
ChIP foregut GSE117136.GATA4.foregut 308 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 308 bp overlap
ChIP DE DE-GATA6-2 308 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 308 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 308 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 283 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 308 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 308 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 308 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 308 bp overlap
ChIP foregut GSE117136.GATA6.foregut 289 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 136 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 270 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 308 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 155 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 289 bp overlap
ChIP K562 ENCFF348IBL 220 bp overlap
ChIP K562 ENCFF771OHZ 127 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 138 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 218 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 150 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 187 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 233 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 308 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 308 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 300 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 308 bp overlap
ChIP K562 ENCFF506JCB 308 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 258 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 298 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 252 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 260 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 196 bp overlap
ChIP K562 ENCFF620GMX 308 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 259 bp overlap
ChIP K562 ENCFF931DJY 308 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 182 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 204 bp overlap