chr15 : 88,600,505 88,600,760
255 bp 23 TFs 1 linked gene
This 255 bp open chromatin element is linked to LINC01586 and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01586 4.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:88,595,505 – 88,605,760
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP CLB-Ga_Dinaciclib GSE133453.BRD4.CLB-Ga_Dinaciclib 250 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 255 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 155 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE45822.ESR1.MCF-7 111 bp overlap
ChIP MCF-7_jc5853 GSE126004.ESR1.MCF-7_jc5853 158 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 255 bp overlap
ChIP DE DE-FOXA2-1 225 bp overlap
ChIP DE DE-FOXA2-2 89 bp overlap
GATA2 2 datasets
ChIP SK-N-SH ENCFF764OZD 255 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 161 bp overlap
GATA3 3 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 246 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 255 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 218 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 255 bp overlap
ChIP DE DE-GATA4-2 255 bp overlap
ChIP foregut GSE117136.GATA4.foregut 255 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 255 bp overlap
GATA6 17 datasets
ChIP AGS GSE51705.GATA6.AGS 217 bp overlap
ChIP AGS GSE51936.GATA6.AGS 175 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 203 bp overlap
ChIP DE DE-GATA6-1 255 bp overlap
ChIP DE DE-GATA6-2 255 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 255 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 255 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 255 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 255 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 255 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 255 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 139 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 255 bp overlap
ChIP foregut GSE117136.GATA6.foregut 255 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 255 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 255 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 255 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 255 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 165 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 188 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 213 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 240 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 244 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 255 bp overlap
NFIB 4 datasets
ChIP MCF-7 ENCFF799WGQ 228 bp overlap
ChIP MCF-7 ENCFF925CGH 239 bp overlap
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 215 bp overlap
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 183 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 199 bp overlap
ChIP K562 ENCFF167YID 172 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 157 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 152 bp overlap
REST 1 dataset
ChIP LNCaP GSE119385.REST.LNCaP 255 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 255 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 255 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 255 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 255 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 240 bp overlap
TAL1 1 dataset
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 137 bp overlap
USP7 1 dataset
ChIP HEK293T GSE61048.USP7.HEK293T 199 bp overlap