chr15 : 88,477,228 88,477,754
526 bp 24 TFs 2 linked genes
This 526 bp open chromatin element is linked to MRPS11 and MRPL46 and is bound by 24 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
MRPS11 9.5 kb Proximal Proximity
MRPL46 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:88,472,228 – 88,482,754
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
AR 2 datasets
ChIP 22Rv1_siARFL_R1881 GSE80742.AR.22Rv1_siARFL_R1881 132 bp overlap
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 148 bp overlap
BRD4 3 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-744 141 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 297 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 309 bp overlap
CTCF 3 datasets
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 78 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 100 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 95 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 344 bp overlap
ESR1 1 dataset
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 229 bp overlap
FOXA1 2 datasets
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 194 bp overlap
ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 100 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 492 bp overlap
ChIP DE DE-FOXA2-2 397 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 519 bp overlap
ChIP DE DE-GATA4-2 526 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 505 bp overlap
ChIP DE DE-GATA6-2 526 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 281 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 444 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 351 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 375 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 452 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 348 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 418 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 370 bp overlap
MAX 1 dataset
ChIP A549 ENCFF310XGQ 100 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 200 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 230 bp overlap
PGR 1 dataset
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 109 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 140 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 82 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR468LUO.SIN3A.MCF-7 207 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 526 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 400 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 486 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 330 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 58 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 373 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 50 bp overlap