chr14 : 59,476,478 59,476,883
405 bp 23 TFs 2 linked genes
This 405 bp open chromatin element is linked to L3HYPDH and JKAMP and is bound by 23 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
L3HYPDH 7.5 kb Proximal Proximity
JKAMP 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:59,471,478 – 59,481,883
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 1 dataset
ChIP DU145_FOXA1 GSE47987.AR.DU145_FOXA1 101 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 119 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 327 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 366 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 378 bp overlap
CTCF 3 datasets
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 345 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 305 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 315 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 237 bp overlap
FOXA2 3 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 294 bp overlap
ChIP DE DE-FOXA2-1 405 bp overlap
ChIP DE DE-FOXA2-2 387 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 405 bp overlap
ChIP DE DE-GATA4-2 405 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 397 bp overlap
ChIP DE DE-GATA6-2 405 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 326 bp overlap
MEF2D 3 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 286 bp overlap
ChIP retina_Hu21 GSE137311.MEF2D.retina_Hu21 300 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 313 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 358 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 307 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 194 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 191 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 284 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 311 bp overlap
RAD21 1 dataset
ChIP MCF-7 GSE72082.RAD21.MCF-7 124 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 232 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 371 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 209 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 402 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 189 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 211 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 283 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 390 bp overlap
STAT5B 1 dataset
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 111 bp overlap
TAF1 1 dataset
ChIP A-549 ENCSR000BPF.TAF1.A-549 205 bp overlap