chr13 : 75,676,386 75,676,877
491 bp 52 TFs 0 linked genes
This 491 bp open chromatin element has no linked target genes and is bound by 52 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:75,671,386 – 75,681,877
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
52 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_ctrl GSE117734.ARID2.BIN-67_ctrl 287 bp overlap
DMRT3 1 dataset
Motif DE_12h DE_12h-DMRT3_MA0610.2 7 bp overlap
DMRTA1 2 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 1 dataset
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 204 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 277 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 391 bp overlap
ChIP BJ1-hTERT_Mimo GSE92491.FOXA2.BJ1-hTERT_Mimo 224 bp overlap
ChIP BJ1-hTERT_MimosinePlus GSE90454.FOXA2.BJ1-hTERT_MimosinePlus 213 bp overlap
ChIP DE DE-FOXA2-1 295 bp overlap
ChIP DE DE-FOXA2-2 360 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXH1 2 datasets
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
GATA1 1 dataset
Motif DE_12h DE_12h-GATA1_MA0035.5 7 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 326 bp overlap
KMT2C 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2C.BIN-67_ctrl 465 bp overlap
KMT2D 1 dataset
ChIP BIN-67_ctrl GSE117734.KMT2D.BIN-67_ctrl 234 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 146 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 317 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 330 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 491 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 252 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 189 bp overlap
Nanog 1 dataset
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
PBX1 1 dataset
Motif DE_12h DE_12h-PBX1_MA0070.2 9 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 341 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 422 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 411 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 329 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 305 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 491 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 491 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 491 bp overlap
ChIP BT-16_NoDox GSE71504.SMARCA4.BT-16_NoDox 258 bp overlap
SMARCC1 5 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 183 bp overlap
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 235 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 491 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 440 bp overlap
ChIP BT-16_Dox GSE71504.SMARCC1.BT-16_Dox 261 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX12 1 dataset
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
SOX2 3 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 349 bp overlap
ChIP KYSE-70 GSE46837.SOX2.KYSE-70 333 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 194 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 491 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEF 1 dataset
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF214 1 dataset
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF784 1 dataset
Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap