chr12 : 100,019,153 100,019,446
293 bp 27 TFs 1 linked gene
This 293 bp open chromatin element is linked to ENSG00000279148 and is bound by 27 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000279148 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:100,014,153 – 100,024,446
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
AR 26 datasets
ChIP 22Rv1_Crispr_WT3 GSE123618.AR.22Rv1_Crispr_WT3 81 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 132 bp overlap
ChIP LNCaP GSE94682.AR.LNCaP 108 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 147 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 55 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 95 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 60 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 153 bp overlap
ChIP LNCaP_DSG GSE114737.AR.LNCaP_DSG 85 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 51 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 57 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 64 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 59 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 71 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 202 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 67 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 89 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 63 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 64 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 56 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 53 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 163 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 71 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 63 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 78 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 61 bp overlap
ARID1A 1 dataset
ChIP LNCaP GSE94682.ARID1A.LNCaP 56 bp overlap
BRD4 3 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 293 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 190 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 230 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 56 bp overlap
DMRTA1 1 dataset
Motif DE_24h DE_24h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_24h DE_24h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 1 dataset
Motif DE_24h DE_24h-DMRTC2_MA1479.2 11 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 112 bp overlap
FOXA1 7 datasets
ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 80 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 52 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 114 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 64 bp overlap
ChIP prostate_P27_T GSE130408.FOXA1.prostate_P27_T 50 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 71 bp overlap
ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 82 bp overlap
FOXH1 1 dataset
Motif DE_24h DE_24h-FOXH1_MA0479.2 8 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 293 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-2 260 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 290 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 286 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 293 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 283 bp overlap
HOXB13 17 datasets
ChIP 22Rv1 GSE96652.HOXB13.22Rv1 99 bp overlap
ChIP LNCaP GSE96652.HOXB13.LNCaP 161 bp overlap
ChIP LNCaP GSE56288.HOXB13.LNCaP 90 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 50 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 150 bp overlap
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 74 bp overlap
ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 56 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 50 bp overlap
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 54 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 58 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 95 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 61 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 73 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 70 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 82 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 57 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 94 bp overlap
MED1 1 dataset
ChIP LNCaP_Veh GSE125245.MED1.LNCaP_Veh 210 bp overlap
MXI1 1 dataset
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
RELA 1 dataset
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 65 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 200 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 293 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 293 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 293 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 292 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 225 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 293 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 210 bp overlap
SP5 1 dataset
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
TCF7L1 1 dataset
Motif DE_24h DE_24h-TCF7L1_MA1421.1 12 bp overlap
TLE3 4 datasets
ChIP 22Rv1 GSE123618.TLE3.22Rv1 70 bp overlap
ChIP 22Rv1_WT3_Crispr GSE123618.TLE3.22Rv1_WT3_Crispr 53 bp overlap
ChIP LNCaP GSE94682.TLE3.LNCaP 74 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 51 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 50 bp overlap
ZSCAN16 1 dataset
Motif DE_24h DE_24h-ZSCAN16_MA2100.1 18 bp overlap