Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

34 transcription factors

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

BRD2 1 dataset

ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 166 bp overlap

BRD4 4 datasets

ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 78 bp overlap

ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 59 bp overlap

ChIP SUM159PT_DMSO GSE131097.BRD4.SUM159PT_DMSO 186 bp overlap

ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 184 bp overlap

CHD4 1 dataset

ChIP 501-mel GSE134848.CHD4.501-mel 146 bp overlap

CTCF 2 datasets

ChIP HeLa-S3 ENCFF565UFR 161 bp overlap

ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 88 bp overlap

DUX4 2 datasets

ChIP HEK293 GSE75791.DUX4.HEK293 319 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 276 bp overlap

EP300 1 dataset

ChIP PC-3 GSE147455.EP300.PC-3 81 bp overlap

ETV1 1 dataset

Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap

Elf5 1 dataset

Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap

FLI1::FOXI1 1 dataset

Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap

GABPA 1 dataset

Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 278 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 342 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 302 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 352 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 301 bp overlap

Hnf1A 1 dataset

Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap

IKZF2 2 datasets

Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap

Ikzf3 1 dataset

Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap

Lef1 1 dataset

Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap

NANOG 5 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 124 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 279 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 238 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 411 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 411 bp overlap

NCAPH2 2 datasets

ChIP IMR-90_Triptolide-30min GSE118494.NCAPH2.IMR-90_Triptolide-30min 204 bp overlap

ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 92 bp overlap

PCBP2 1 dataset

ChIP Hep-G2 GSE120104.PCBP2.Hep-G2 206 bp overlap

PKNOX1 1 dataset

ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 196 bp overlap

POU5F1 3 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 290 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 411 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 184 bp overlap

RAD21 1 dataset

ChIP HeLa-S3 ENCFF775CHI 231 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 308 bp overlap

SMARCA4 1 dataset

ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 411 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 234 bp overlap

SPI1 3 datasets

ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 165 bp overlap

ChIP EM-3 GSE128834.SPI1.EM-3 163 bp overlap

ChIP K-562 GSE70482.SPI1.K-562 144 bp overlap

SPIB 1 dataset

Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

ZNF143 1 dataset

ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 169 bp overlap

ZNF366 2 datasets

ChIP HEK293 ENCFF799ATK 292 bp overlap

ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 198 bp overlap

ZNF582 1 dataset

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

Zfp961 1 dataset

Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap

Genome Browser