chr12 : 78,407,839 78,408,023
184 bp 22 TFs 0 linked genes
This 184 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:78,402,839 – 78,413,023
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 184 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 138 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 184 bp overlap
BRD4 2 datasets
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 111 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 184 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 151 bp overlap
DUX4 1 dataset
ChIP HEK293 GSE75791.DUX4.HEK293 184 bp overlap
FOXA2 1 dataset
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 60 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 154 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 184 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 184 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 139 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 184 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 184 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 178 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 184 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 155 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 184 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 93 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 85 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 184 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 154 bp overlap
MNT 2 datasets
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 184 bp overlap
ChIP HepG2 ENCFF701PYP 184 bp overlap
MYCN 6 datasets
ChIP BE2C GSE80151.MYCN.BE2C 184 bp overlap
ChIP CHP-134 GSE129588.MYCN.CHP-134 184 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 184 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 161 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 184 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 182 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 89 bp overlap
SETDB1 3 datasets
ChIP HEK293 ENCFF676PLV 184 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 184 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 184 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 149 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 131 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 105 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 184 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 184 bp overlap
USF2 2 datasets
ChIP GM12878 GSE97661.USF2.GM12878 183 bp overlap
ChIP WTC11 ENCFF139JAW 184 bp overlap