chr12 : 71,948,331 71,948,778
447 bp 29 TFs 1 linked gene
This 447 bp open chromatin element is linked to TPH2 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TPH2 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:71,943,331 – 71,953,778
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 272 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 447 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 288 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 300 bp overlap
BRD4 7 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 231 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 138 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 148 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 258 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 347 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 260 bp overlap
ChIP hESC GSE33281.BRD4.hESC 111 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 447 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 447 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 213 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 270 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 409 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
FOXA1 1 dataset
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 220 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 218 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 331 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 349 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 326 bp overlap
ChIP H1 ENCFF833NJP 205 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 396 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 345 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 115 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 403 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 316 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 415 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 312 bp overlap
TBP 5 datasets
ChIP H1 ENCFF859IIO 350 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 274 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 151 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 264 bp overlap
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 262 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 433 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 195 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 130 bp overlap
YY1 2 datasets
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 144 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 369 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 301 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 271 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 256 bp overlap
ZSCAN18 1 dataset
ChIP WTC11 ENCFF867QWX 230 bp overlap