Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

26 transcription factors

BRD4 6 datasets

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 218 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 223 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 223 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 223 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 223 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 223 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 223 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 223 bp overlap

EZH2 4 datasets

ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 96 bp overlap

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 148 bp overlap

ChIP SF8628 GSE94834.EZH2.SF8628 106 bp overlap

ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 98 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 223 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 117 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 216 bp overlap

ChIP DE DE-GATA4-2 223 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 191 bp overlap

ChIP DE DE-GATA6-2 223 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 223 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 223 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 223 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 223 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 223 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 223 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 223 bp overlap

JUN 4 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 110 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 223 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 223 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 223 bp overlap

KDM4A 1 dataset

ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 175 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 182 bp overlap

NUTM1 2 datasets

ChIP NMC24335 GSE96775.NUTM1.NMC24335 223 bp overlap

ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 203 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 223 bp overlap

POU2F2 1 dataset

ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 174 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 191 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 173 bp overlap

RARA 1 dataset

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 223 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 223 bp overlap

ChIP neural cell ENCFF882LXX 223 bp overlap

RNF2 1 dataset

ChIP fibroblast GSE139053.RNF2.fibroblast 178 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 223 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 223 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 223 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 223 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 223 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 223 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 223 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 223 bp overlap

SMARCA4 4 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 223 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 223 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 223 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 194 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S10-DE-d1-BAF155-exp1 57 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 168 bp overlap

SOX2 2 datasets

ChIP HNSC GSE69479.SOX2.HNSC 223 bp overlap

ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 116 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 189 bp overlap

Genome Browser