Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 276 bp overlap

CTCF 3 datasets

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap

Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 336 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 297 bp overlap

ChIP DE DE-FOXA2-2 264 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 407 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-2 412 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 262 bp overlap

GLI3 2 datasets

Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap

Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 448 bp overlap

Gli1 2 datasets

Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap

Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap

Gli2 2 datasets

Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap

Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap

MEIS1 3 datasets

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

Mecom 3 datasets

Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap

Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap

Motif ES_0h ES_0h-Mecom_MA0029.2 11 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 321 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 506 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 198 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 368 bp overlap

ChIP hESC GSE18292.NANOG.hESC 102 bp overlap

NKX2-3 3 datasets

Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap

Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap

Motif ES_0h ES_0h-NKX2-3_MA0672.2 8 bp overlap

PPARA::RXRA 3 datasets

Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap

Motif DE_36h DE_36h-PPARARXRA_MA1148.2 17 bp overlap

Motif ES_0h ES_0h-PPARARXRA_MA1148.2 17 bp overlap

RAD21 1 dataset

ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 339 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 356 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 348 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 366 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 255 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 366 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 300 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 350 bp overlap

SOX2 3 datasets

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 231 bp overlap

ChIP hESC GSE18292.SOX2.hESC 98 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 227 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 224 bp overlap

TEAD4 1 dataset

ChIP H1 ENCFF778PAX 245 bp overlap

ZBTB12 3 datasets

Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap

Motif DE_36h DE_36h-ZBTB12_MA1649.2 7 bp overlap

Motif ES_0h ES_0h-ZBTB12_MA1649.2 7 bp overlap

ZIC1 3 datasets

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap

Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap

ZIC4 3 datasets

Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap

Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap

Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap

ZIC5 3 datasets

Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap

Motif DE_36h DE_36h-ZIC5_MA1584.2 15 bp overlap

Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap

ZKSCAN1 3 datasets

Motif DE_12h DE_12h-ZKSCAN1_MA1585.2 9 bp overlap

Motif DE_36h DE_36h-ZKSCAN1_MA1585.2 9 bp overlap

Motif ES_0h ES_0h-ZKSCAN1_MA1585.2 9 bp overlap

ZNF189 3 datasets

Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap

Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap

Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap

ZNF423 1 dataset

ChIP WTC11 ENCFF574PBR 317 bp overlap

ZNF707 3 datasets

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap

Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap

Zfp335 1 dataset

Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap

Zic2 2 datasets

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap

Genome Browser