chr11 : 84,914,490 – 84,915,042

552 bp 44 TFs 0 linked genes

This 552 bp open chromatin element has no linked target genes and is bound by 44 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 184 bp overlap

ATF2 1 dataset

Motif ES_0h ES_0h-ATF2_MA1632.2 10 bp overlap

ATF3 1 dataset

Motif ES_0h ES_0h-ATF3_MA0605.3 10 bp overlap

ATF7 1 dataset

Motif ES_0h ES_0h-ATF7_MA0834.2 10 bp overlap

BCL6 2 datasets

Motif DE_12h DE_12h-BCL6_MA0463.3 13 bp overlap

Motif ES_0h ES_0h-BCL6_MA0463.3 13 bp overlap

BCL6B 4 datasets

Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap

Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap

Bcl11B 2 datasets

Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap

Motif ES_0h ES_0h-Bcl11B_MA1989.2 9 bp overlap

CDX2 2 datasets

Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap

Motif ES_0h ES_0h-CDX2_MA0465.3 8 bp overlap

CDX4 2 datasets

Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap

Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap

CREB1 1 dataset

Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap

CREBBP 1 dataset

ChIP LS180_125 GSE39277.CREBBP.LS180_125 81 bp overlap

Creb5 1 dataset

Motif ES_0h ES_0h-Creb5_MA0840.2 10 bp overlap

FOS 1 dataset

Motif ES_0h ES_0h-FOS_MA1951.2 13 bp overlap

FOS::JUN 1 dataset

Motif ES_0h ES_0h-FOSJUN_MA1126.2 10 bp overlap

FOSB::JUN 1 dataset

Motif ES_0h ES_0h-FOSBJUN_MA1127.1 11 bp overlap

FOSB::JUNB 1 dataset

Motif ES_0h ES_0h-FOSBJUNB_MA1136.1 10 bp overlap

FOSL1::JUN 1 dataset

Motif ES_0h ES_0h-FOSL1JUN_MA1129.1 10 bp overlap

FOSL1::JUND 1 dataset

Motif ES_0h ES_0h-FOSL1JUND_MA1143.2 9 bp overlap

FOSL2::JUN 1 dataset

Motif ES_0h ES_0h-FOSL2JUN_MA1131.2 10 bp overlap

FOSL2::JUNB 1 dataset

Motif ES_0h ES_0h-FOSL2JUNB_MA1139.2 10 bp overlap

FOSL2::JUND 1 dataset

Motif ES_0h ES_0h-FOSL2JUND_MA1145.2 10 bp overlap

GABPA 1 dataset

ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap

HOXB13 2 datasets

Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap

Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap

Hoxa13 2 datasets

Motif DE_12h DE_12h-Hoxa13_MA0650.4 8 bp overlap

Motif ES_0h ES_0h-Hoxa13_MA0650.4 8 bp overlap

Hoxd13 2 datasets

Motif DE_12h DE_12h-Hoxd13_MA0909.4 7 bp overlap

Motif ES_0h ES_0h-Hoxd13_MA0909.4 7 bp overlap

JDP2 1 dataset

Motif ES_0h ES_0h-JDP2_MA0656.2 10 bp overlap

JUN 5 datasets

ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 404 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 487 bp overlap

Motif ES_0h ES_0h-JUN_MA0488.2 10 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 483 bp overlap

JUN::JUNB 1 dataset

Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap

JUNB 1 dataset

Motif ES_0h ES_0h-JUNB_MA1140.3 11 bp overlap

JUND 1 dataset

Motif ES_0h ES_0h-JUND_MA0492.2 11 bp overlap

Msgn1 2 datasets

Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap

Motif ES_0h ES_0h-Msgn1_MA1524.3 10 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 418 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 408 bp overlap

POU2F3 1 dataset

ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 144 bp overlap

POU5F1 4 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 350 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 289 bp overlap

RUNX2 2 datasets

Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap

Motif ES_0h ES_0h-RUNX2_MA0511.2 9 bp overlap

RUNX3 2 datasets

Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap

Motif ES_0h ES_0h-RUNX3_MA0684.3 8 bp overlap

Runx1 2 datasets

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 297 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 481 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 194 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 400 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 421 bp overlap

ZNF382 2 datasets

Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap

Motif ES_0h ES_0h-ZNF382_MA1594.1 24 bp overlap

ZSCAN16 2 datasets

Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap

Motif ES_0h ES_0h-ZSCAN16_MA2100.1 18 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap

Zic2 2 datasets

Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap

Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap