chr11 : 41,456,164 41,456,575
411 bp 20 TFs 1 linked gene
This 411 bp open chromatin element is linked to LRRC4C and is bound by 20 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LRRC4C 3.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:41,451,164 – 41,461,575
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 404 bp overlap
ChIP H1 ENCFF399KAM 205 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 411 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 411 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 264 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 315 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 176 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 296 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 235 bp overlap
EP300 1 dataset
ChIP H1 ENCFF927IYK 297 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 132 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 144 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 275 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 277 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 385 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 255 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 152 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 411 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 292 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 224 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 411 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 325 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 381 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 155 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 150 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
SMARCA4 4 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 112 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 264 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 337 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 316 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 353 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 317 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 277 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 274 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 221 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 182 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 246 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 242 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 180 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 239 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 322 bp overlap