chr11 : 13,344,702 – 13,345,180
478 bp 25 TFs 0 linked genes
This 478 bp open chromatin element has no linked target genes and is bound by 25 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:13,339,702 – 13,350,180
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
25 transcription factors
Source
Cell type
ARID4B 1 dataset
ChIP PC-3 GSE116669.ARID4B.PC-3 257 bp overlap
CTCF 145 datasets
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 178 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 478 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 201 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 321 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 226 bp overlap
ChIP C4-2B ENCFF821XVN 143 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 142 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 128 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 309 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 157 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 226 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 478 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 338 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 362 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 106 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 55 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 174 bp overlap
ChIP GM12872 ENCFF697BYI 285 bp overlap
ChIP GM12873 ENCFF711LOS 285 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 187 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 434 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 132 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 402 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 340 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 196 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 269 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 107 bp overlap
ChIP HeLa-S3 ENCFF626XQK 251 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 478 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 165 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 346 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 454 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 217 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 316 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 210 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 117 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 167 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 295 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 128 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 245 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 76 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 234 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 229 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 202 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP K562 ENCFF598YSU 212 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 226 bp overlap
ChIP Loucy ENCFF359TVQ 64 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 478 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 57 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 478 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 257 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 117 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 157 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 64 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 54 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 478 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 159 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 190 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 74 bp overlap
ChIP RWPE2 ENCFF911IEE 82 bp overlap
ChIP SEM GSE117864.CTCF.SEM 153 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 122 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 478 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 87 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 317 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 258 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 105 bp overlap
ChIP WTC11 ENCFF658QVH 70 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 198 bp overlap
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 186 bp overlap
ChIP astrocyte ENCFF558APA 183 bp overlap
ChIP astrocyte ENCFF558APA 387 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 235 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 170 bp overlap
ChIP body of pancreas ENCFF756FGB 67 bp overlap
ChIP brain ENCFF099ASU 87 bp overlap
ChIP breast_epithelium ENCSR661NXJ.CTCF.breast_epithelium 316 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 374 bp overlap
ChIP chondrocyte ENCFF134ORZ 75 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 277 bp overlap
ChIP colon_transverse ENCSR236YGF.CTCF.colon_transverse 238 bp overlap
ChIP coronary artery ENCFF383OZM 57 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF041CKA 67 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 63 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 67 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 50 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 106 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812JWS 64 bp overlap
ChIP endothelial cell ENCFF663LIE 142 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 355 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 261 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 185 bp overlap
ChIP esophagus_muscularis-mucosa ENCSR559KAB.CTCF.esophagus_muscularis-mucosa 85 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 211 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 71 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 217 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 273 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 144 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 139 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 325 bp overlap
ChIP gastrocnemius medialis ENCFF071DIF 56 bp overlap
ChIP gastrocnemius-medialis ENCSR428BKN.CTCF.gastrocnemius-medialis 213 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 375 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 478 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 289 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 58 bp overlap
ChIP heart right ventricle ENCFF725NNJ 84 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 165 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 327 bp overlap
ChIP left lung ENCFF620MAT 86 bp overlap
ChIP lung_left_upper-lobe ENCSR027FSZ.CTCF.lung_left_upper-lobe 276 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 125 bp overlap
ChIP natural killer cell ENCFF517SNI 149 bp overlap
ChIP nephron ENCFF411ACD 66 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 160 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 83 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 158 bp overlap
ChIP neuron GSE115407.CTCF.neuron 79 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 87 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 131 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 294 bp overlap
ChIP pancreas_body ENCSR265PFQ.CTCF.pancreas_body 83 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 103 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 56 bp overlap
ChIP prostate gland ENCFF462RCQ 52 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 206 bp overlap
ChIP right atrium auricular region ENCFF471FFM 55 bp overlap
ChIP sigmoid colon ENCFF397ZZF 50 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 190 bp overlap
ChIP spleen ENCFF139JDN 72 bp overlap
ChIP spleen ENCFF520HPZ 78 bp overlap
ChIP spleen ENCSR343RJH.CTCF.spleen 204 bp overlap
ChIP spleen ENCSR225YGX.CTCF.spleen 190 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 273 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 166 bp overlap
ChIP stomach ENCFF918GTC 97 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 61 bp overlap
ChIP thyroid gland ENCFF163TUI 55 bp overlap
ChIP transverse colon ENCFF594PFO 58 bp overlap
ChIP upper lobe of left lung ENCFF170ORD 95 bp overlap
ChIP vagina ENCFF026NYX 78 bp overlap
ESR1 2 datasets
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 166 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 185 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 285 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 198 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 246 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 328 bp overlap
ChIP DE DE-FOXA2-2 254 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 329 bp overlap
ChIP DE DE-GATA4-2 298 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 298 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 308 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 289 bp overlap
ChIP DE DE-GATA6-2 335 bp overlap
JUN 2 datasets
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 130 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 181 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 242 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 146 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 118 bp overlap
RAD21 7 datasets
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 192 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 63 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 55 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 171 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 162 bp overlap
ChIP THP-1_PMA_Dex-0h GSE103477.RAD21.THP-1_PMA_Dex-0h 125 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 178 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 138 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 321 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 259 bp overlap
SMC1 2 datasets
ChIP HCAEC GSE101921.SMC1.HCAEC 259 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 478 bp overlap
SMC3 2 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 152 bp overlap
ChIP K-562 ENCSR000EGW.SMC3.K-562 112 bp overlap
SPI1 1 dataset
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 95 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 386 bp overlap
TP63 1 dataset
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 181 bp overlap
ZNF207 1 dataset
ChIP GM12878 ENCSR117KWH.ZNF207.GM12878 68 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 332 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 202 bp overlap
ZNF737 1 dataset
ChIP Hep-G2 ENCSR127IHN.ZNF737.Hep-G2 63 bp overlap
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