chr11 : 13,298,780 13,299,099
319 bp 30 TFs 0 linked genes
This 319 bp open chromatin element has no linked target genes and is bound by 30 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:13,293,780 – 13,304,099
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 319 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 262 bp overlap
CTCF 23 datasets
ChIP BE2C ENCFF757SRF 271 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 168 bp overlap
ChIP GM23338 ENCFF531QOI 319 bp overlap
ChIP GM23338 ENCFF772DML 197 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 275 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 183 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 319 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 242 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 264 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 127 bp overlap
ChIP SK-N-SH ENCFF731NJX 237 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 261 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 243 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 201 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 151 bp overlap
ChIP endodermal cell ENCFF471YCZ 319 bp overlap
ChIP keratinocyte ENCFF046PBT 185 bp overlap
ChIP keratinocyte ENCFF291YDC 185 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 240 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 127 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 281 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 143 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 257 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 203 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 183 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 296 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 269 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 319 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 268 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 319 bp overlap
ChIP SK-N-SH ENCFF764OZD 192 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 305 bp overlap
GATA3 4 datasets
ChIP SH-SY5Y ENCFF475HYF 319 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 293 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 237 bp overlap
ChIP SK-N-SH ENCFF040SSB 319 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 319 bp overlap
ChIP DE DE-GATA4-2 304 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 319 bp overlap
ChIP DE DE-GATA6-2 235 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 310 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 305 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 319 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 212 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 160 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 319 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 133 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCFF746HVJ 319 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 251 bp overlap
MYC 1 dataset
ChIP NB69 GSE138295.MYC.NB69 299 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 233 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 268 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 319 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF044PYR 319 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 214 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 303 bp overlap
ChIP neuroblastoma GSE115862.RAD21.neuroblastoma 319 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 178 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 319 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 319 bp overlap
SMC3 2 datasets
ChIP SK-N-SH ENCFF791WFB 239 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 224 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 267 bp overlap
TCF4 1 dataset
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 199 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 319 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 229 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 229 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 319 bp overlap
ZNF607 1 dataset
ChIP HepG2 ENCFF118ANP 186 bp overlap