chr9 : 100,223,721 100,223,990
269 bp 36 TFs 0 linked genes
This 269 bp open chromatin element has no linked target genes and is bound by 36 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:100,218,721 – 100,228,990
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
Atf3 1 dataset
Motif DE_60h DE_60h-Atf3_MA1988.2 7 bp overlap
BATF 1 dataset
Motif DE_60h DE_60h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_60h DE_60h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_60h DE_60h-BNC2_MA1928.2 7 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 217 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 122 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 122 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 251 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 205 bp overlap
FOSL1 2 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 269 bp overlap
ChIP K562 ENCFF455MKD 269 bp overlap
FOSL2 1 dataset
Motif DE_60h DE_60h-FOSL2_MA0478.2 10 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 269 bp overlap
GATA1 5 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 91 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 253 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 181 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 171 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 204 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 242 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 269 bp overlap
ChIP DE DE-GATA4-2 269 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 212 bp overlap
ChIP foregut GSE117136.GATA4.foregut 269 bp overlap
GATA5 2 datasets
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 162 bp overlap
ChIP DE DE-GATA6-1 269 bp overlap
ChIP DE DE-GATA6-2 269 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 269 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 269 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 269 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 269 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 269 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 269 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 269 bp overlap
ChIP foregut GSE117136.GATA6.foregut 269 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 269 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 158 bp overlap
Gata3 2 datasets
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 238 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 258 bp overlap
Jun 1 dataset
Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap
MAFK 1 dataset
Motif DE_60h DE_60h-MAFK_MA0496.4 10 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 127 bp overlap
Mecom 2 datasets
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 269 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 205 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 263 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 183 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 269 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 216 bp overlap
TFAP2A 1 dataset
Motif DE_60h DE_60h-TFAP2A_MA0872.1 13 bp overlap
TFAP2C 1 dataset
Motif DE_60h DE_60h-TFAP2C_MA0815.1 13 bp overlap
TRPS1 2 datasets
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 240 bp overlap
ZNF530 1 dataset
Motif DE_60h DE_60h-ZNF530_MA1981.2 14 bp overlap