chr9 : 38,433,915 38,434,850
935 bp 31 TFs 3 linked genes
This 935 bp open chromatin element is linked to IGFBPL1, ALDH1B1, and ANKRD18A and is bound by 31 transcription factors.
Linked Genes
3 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
IGFBPL1 9.5 kb Proximal Proximity
ALDH1B1 41.8 kb Distal Multiome
ANKRD18A 186.1 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:38,428,915 – 38,439,850
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
31 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 60 bp overlap
ASH2L 1 dataset
ChIP HepG2 ENCFF207QHL 396 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF521IZR 405 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 212 bp overlap
ChIP Hep-G2 ENCSR000EDT.BHLHE40.Hep-G2 150 bp overlap
ChIP HepG2 ENCFF961RID 297 bp overlap
CEBPG 1 dataset
ChIP K562 ENCFF783ADE 112 bp overlap
CTCF 2 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 331 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 143 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 697 bp overlap
ChIP DE DE-FOXA2-2 718 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 178 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 768 bp overlap
ChIP DE DE-GATA4-2 924 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 256 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 837 bp overlap
ChIP DE DE-GATA6-2 935 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 645 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 749 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 704 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 796 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 935 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 726 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 517 bp overlap
HSF1 4 datasets
ChIP HCT-116_A10_43 GSE152144.HSF1.HCT-116_A10_43 165 bp overlap
ChIP HCT-116_A8_43 GSE152144.HSF1.HCT-116_A8_43 146 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 118 bp overlap
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 88 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 424 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 290 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 125 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 81 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 297 bp overlap
NR3C1 1 dataset
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 98 bp overlap
PAXIP1 1 dataset
ChIP HepG2 ENCFF526NOJ 444 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 148 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 388 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 341 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 357 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 105 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 552 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 378 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 798 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 806 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 746 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 721 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 834 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 630 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 594 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 753 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 337 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 274 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 558 bp overlap
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 122 bp overlap
SOX13 3 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 224 bp overlap
ChIP HepG2 ENCFF062VSQ 288 bp overlap
ChIP HepG2 ENCFF231PAK 341 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 400 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 483 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 256 bp overlap
SOX6 4 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 378 bp overlap
ChIP HepG2 ENCFF767OCK 242 bp overlap
ChIP K-562 ENCSR788RSW.SOX6.K-562 324 bp overlap
ChIP K562 ENCFF059YCJ 181 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 117 bp overlap