chr9 : 23,771,840 23,772,499
659 bp 32 TFs 0 linked genes
This 659 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:23,766,840 – 23,777,499
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 269 bp overlap
BRD4 1 dataset
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 233 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 212 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 114 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 303 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE46166.FOSL1.BT-549 659 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 274 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 593 bp overlap
ChIP DE DE-FOXA2-2 515 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 598 bp overlap
ChIP DE DE-GATA4-2 580 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 542 bp overlap
ChIP DE DE-GATA6-2 561 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 499 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 513 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 292 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 514 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 581 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 519 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 206 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 288 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 448 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 305 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 117 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 294 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 108 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 333 bp overlap
NELFE 1 dataset
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 119 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 451 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 277 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 124 bp overlap
NR3C1 1 dataset
ChIP HeLa-B2_P65KD_TA_TNFA GSE24518.NR3C1.HeLa-B2_P65KD_TA_TNFA 162 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 485 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 102 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 70 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 545 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 142 bp overlap
SIX2 1 dataset
ChIP HEK GSE73865.SIX2.HEK 73 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 491 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 273 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 449 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 364 bp overlap
SMARCA4 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 323 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 143 bp overlap
STAT3 3 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 205 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 183 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 360 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 267 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 267 bp overlap
ZNF384 2 datasets
ChIP HEK293T ENCFF019DZX 122 bp overlap
ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 96 bp overlap