chr1 : 17,910,528 17,911,014
486 bp 37 TFs 1 linked gene
This 486 bp open chromatin element is linked to IGSF21 and is bound by 37 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
IGSF21 196.9 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:17,905,528 – 17,916,014
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 128 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 209 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 233 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 116 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 279 bp overlap
EZH2 2 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 228 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 474 bp overlap
FEZF1 1 dataset
ChIP HEK293 ENCFF528YED 347 bp overlap
FOS 2 datasets
ChIP IMR-90 ENCFF179EDA 270 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 168 bp overlap
FOSL2 1 dataset
ChIP LPS141 GSE111253.FOSL2.LPS141 160 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 446 bp overlap
ChIP DE DE-FOXA2-2 437 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 60 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 124 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 486 bp overlap
ChIP DE DE-GATA4-2 486 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 209 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 312 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 236 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 486 bp overlap
ChIP DE DE-GATA6-2 486 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 409 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 310 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 486 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 358 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 280 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 457 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCFF264FBS 325 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 233 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 354 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 456 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 469 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 381 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 139 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 193 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 240 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 262 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 186 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 248 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 138 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 319 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 214 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 486 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 220 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 486 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 486 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 167 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 69 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 282 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 178 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 446 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 486 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 180 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 184 bp overlap
ZEB2 3 datasets
ChIP HEK293 ENCFF847JIE 275 bp overlap
ChIP HEK293 ENCFF847JIE 193 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 349 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 236 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 380 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 325 bp overlap