Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

AR 2 datasets

ChIP LNCaP GSE80256.AR.LNCaP 228 bp overlap

ChIP MCF-7 GSE48930.AR.MCF-7 153 bp overlap

ASCL1 2 datasets

Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap

Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

CTCF 8 datasets

Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap

Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap

Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap

Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap

Motif DE_60h DE_60h-CTCF_MA0139.2 15 bp overlap

Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap

ChIP GM20000 ENCFF217HWJ 165 bp overlap

ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 335 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 222 bp overlap

ERG 1 dataset

ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 235 bp overlap

ETV2 3 datasets

Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap

Motif DE_36h DE_36h-ETV2_MA0762.2 9 bp overlap

Motif DE_60h DE_60h-ETV2_MA0762.2 9 bp overlap

ETV2::FOXI1 3 datasets

Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap

Motif DE_36h DE_36h-ETV2FOXI1_MA1942.2 11 bp overlap

Motif DE_60h DE_60h-ETV2FOXI1_MA1942.2 11 bp overlap

FIGLA 3 datasets

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap

Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap

FOXH1 2 datasets

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 367 bp overlap

GATA6 2 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 306 bp overlap

Hmx1 2 datasets

Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap

Motif DE_36h DE_36h-Hmx1_MA0896.2 9 bp overlap

Hmx3 2 datasets

Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap

Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap

IKZF1 3 datasets

Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap

Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap

Motif DE_60h DE_60h-IKZF1_MA1508.2 8 bp overlap

IRF3 2 datasets

Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap

Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap

MYB 2 datasets

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

Motif DE_36h DE_36h-MYB_MA0100.4 6 bp overlap

MYOG 1 dataset

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

NCOA2 1 dataset

ChIP MCF-7 ERP000901.NCOA2.MCF-7 304 bp overlap

NCOA3 1 dataset

ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 205 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

NRIP1 1 dataset

ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 178 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Nfatc2 2 datasets

Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap

Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PDX1 1 dataset

ChIP hiPSC GSE125768.PDX1.hiPSC 232 bp overlap

POU2F1 1 dataset

ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 153 bp overlap

POU4F2 1 dataset

ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap

REL 3 datasets

Motif DE_12h DE_12h-REL_MA0101.1 10 bp overlap

Motif DE_36h DE_36h-REL_MA0101.1 10 bp overlap

Motif DE_60h DE_60h-REL_MA0101.1 10 bp overlap

RELA 3 datasets

Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap

Motif DE_36h DE_36h-RELA_MA0107.1 10 bp overlap

Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap

SMAD2 3 datasets

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

Motif DE_36h DE_36h-SMAD2_MA1964.2 6 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 240 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 676 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 501 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 581 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 551 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 441 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 345 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 357 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 441 bp overlap

SPIC 3 datasets

Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap

Motif DE_36h DE_36h-SPIC_MA0687.2 13 bp overlap

Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap

STAT1::STAT2 2 datasets

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

TFAP2C 1 dataset

ChIP HCC1954 GSE126897.TFAP2C.HCC1954 126 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

ZBTB7C 3 datasets

Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap

Motif DE_36h DE_36h-ZBTB7C_MA0695.2 8 bp overlap

Motif DE_60h DE_60h-ZBTB7C_MA0695.2 8 bp overlap

ZEB1 3 datasets

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap

Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap

ZNF157 2 datasets

Motif DE_12h DE_12h-ZNF157_MA2331.1 21 bp overlap

Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap

ZNF528 2 datasets

Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap

Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap

Genome Browser